PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021653744.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 171aa    MW: 19017.7 Da    PI: 8.7752
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021653744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.42.5e-0882961126
                    GTS--TTTTT-SS-SS CS
         zf-CCCH 11 rtGtCkyGdrCkFaHg 26
                    + G+C+yGd+Ck+ H+
  XP_021653744.1 82 K-GFCPYGDSCKYLHP 96
                    4.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MPLGKYYCDY CDKEFQDTPV ARKRHLQSSS HLRAKSLWYN SLKSQDLNQA YIDGGGGAFT  60
KGVCNRFVKT FSICAFLSYV LKGFCPYGDS CKYLHPTNSN NLQNNVNLFQ ATRLMNNVHS  120
PIILGNQLVG GSSLPADVVR DSMGMPWGNL PPSLKPPPEG GYLPFPFVDW G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.14e-48C3H family protein