PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653835.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 693aa MW: 76809.4 Da PI: 9.7258

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	592	641	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_021653835.1 592 RRPFSVTEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 641 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKIGENQ MCAFDLLAIV AGNLLLEKES 60 TPSSSDASAG KDHCMVVNNT VKNEWQDEQK NMKVEAHDQG SAARSFFVSG LVSQDNDQNH 120 CSKGSLYAQN DHNLELASTE VTSECAKRFD SEELVNRKSK NEIRTFASKV EGGSSGYREF 180 NDCKLEGESK NLINDGSCKS GKMQNGTVAN TCSFEDPVVW DGKPHALVSS DSSAKVPLCG 240 NNISHSSYPT NGDNLNVDSR DDDENSSGCT HPRTTKKFFR PAPRIGDRRI RKILASKYWK 300 VAPRLKDVTL SNTDGADSKS LYLKRKYYYK YQRSERLYPF KKRKHFAYAS QSNSEGGISN 360 EFICNSPQKG NDGDASASGR KKHGVIGASS SVAGQHNSFR PRDSHVKLRI KSFKVPELFI 420 EIPESATVGL LKRTVMEAVT AILGGGLRVG VLLQGKKVRD DNKTLLQTGI CHNIQLDALG 480 FSLEPNSSRT PPSLSPGDSP FLVDTPQPVS RYPPAPSLVQ QIACAASPEP HGTNLGNLIE 540 SDHDSAPSPT DIDKSTDSKA LVPVPEMNIE ALAVVPAHRK SKRSEIVQRR IRRPFSVTEV 600 EALVQAVEKL GTGRWRDVKL RAFDNAKHRT YVDLKDKWKT LVHTARISPQ QRRGEPVPQE 660 LLDRVLTAHA FWSQQQAKQQ HKQQQQPETC LLL

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKIGENQ MCAFDLLAIV AGNLLLEKES  60
TPSSSDASAG KDHCMVVNNT VKNEWQDEQK NMKVEAHDQG SAARSFFVSG LVSQDNDQNH  120
CSKGSLYAQN DHNLELASTE VTSECAKRFD SEELVNRKSK NEIRTFASKV EGGSSGYREF  180
NDCKLEGESK NLINDGSCKS GKMQNGTVAN TCSFEDPVVW DGKPHALVSS DSSAKVPLCG  240
NNISHSSYPT NGDNLNVDSR DDDENSSGCT HPRTTKKFFR PAPRIGDRRI RKILASKYWK  300
VAPRLKDVTL SNTDGADSKS LYLKRKYYYK YQRSERLYPF KKRKHFAYAS QSNSEGGISN  360
EFICNSPQKG NDGDASASGR KKHGVIGASS SVAGQHNSFR PRDSHVKLRI KSFKVPELFI  420
EIPESATVGL LKRTVMEAVT AILGGGLRVG VLLQGKKVRD DNKTLLQTGI CHNIQLDALG  480
FSLEPNSSRT PPSLSPGDSP FLVDTPQPVS RYPPAPSLVQ QIACAASPEP HGTNLGNLIE  540
SDHDSAPSPT DIDKSTDSKA LVPVPEMNIE ALAVVPAHRK SKRSEIVQRR IRRPFSVTEV  600
EALVQAVEKL GTGRWRDVKL RAFDNAKHRT YVDLKDKWKT LVHTARISPQ QRRGEPVPQE  660
LLDRVLTAHA FWSQQQAKQQ HKQQQQPETC LLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	344	KRKYYYKYQRSERLYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-145	MYB_related family protein