PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653836.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 678aa MW: 75370.9 Da PI: 9.6774

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	577	626	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_021653836.1 577 RRPFSVTEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 626 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKIGENQ MCAFDLLAIV AGNLLLEKES 60 TPSSSDASAG KDHCMVVNNT VKNEWQDEQK NMKVEAHDQG SAARSFFVSG LVSQDNDQNH 120 CSKGSLYAQN DHNLELASTE VTSECAKRFD SEELVNRKSK NEIRTFASKV EGGSSGYREF 180 NDCKLEGESK NLINDGSCKS GKMQNGTVAN TCSFEDPVVW DGKPHALVSS DSSAKVPLCG 240 NNISHSSYPT NGDNLNVDSR DDDENSSGCT HPRTTKKFFR PAPRIGDRRI RKILASKYWK 300 VAPRLKDVTL SNTDGADSKS LYLKRKYYYK YQRSERLYPF KKRKHFAYAS QSNSEGGISN 360 EFICNSPQKV IGASSSVAGQ HNSFRPRDSH VKLRIKSFKV PELFIEIPES ATVGLLKRTV 420 MEAVTAILGG GLRVGVLLQG KKVRDDNKTL LQTGICHNIQ LDALGFSLEP NSSRTPPSLS 480 PGDSPFLVDT PQPVSRYPPA PSLVQQIACA ASPEPHGTNL GNLIESDHDS APSPTDIDKS 540 TDSKALVPVP EMNIEALAVV PAHRKSKRSE IVQRRIRRPF SVTEVEALVQ AVEKLGTGRW 600 RDVKLRAFDN AKHRTYVDLK DKWKTLVHTA RISPQQRRGE PVPQELLDRV LTAHAFWSQQ 660 QAKQQHKQQQ QPETCLLL

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKIGENQ MCAFDLLAIV AGNLLLEKES  60
TPSSSDASAG KDHCMVVNNT VKNEWQDEQK NMKVEAHDQG SAARSFFVSG LVSQDNDQNH  120
CSKGSLYAQN DHNLELASTE VTSECAKRFD SEELVNRKSK NEIRTFASKV EGGSSGYREF  180
NDCKLEGESK NLINDGSCKS GKMQNGTVAN TCSFEDPVVW DGKPHALVSS DSSAKVPLCG  240
NNISHSSYPT NGDNLNVDSR DDDENSSGCT HPRTTKKFFR PAPRIGDRRI RKILASKYWK  300
VAPRLKDVTL SNTDGADSKS LYLKRKYYYK YQRSERLYPF KKRKHFAYAS QSNSEGGISN  360
EFICNSPQKV IGASSSVAGQ HNSFRPRDSH VKLRIKSFKV PELFIEIPES ATVGLLKRTV  420
MEAVTAILGG GLRVGVLLQG KKVRDDNKTL LQTGICHNIQ LDALGFSLEP NSSRTPPSLS  480
PGDSPFLVDT PQPVSRYPPA PSLVQQIACA ASPEPHGTNL GNLIESDHDS APSPTDIDKS  540
TDSKALVPVP EMNIEALAVV PAHRKSKRSE IVQRRIRRPF SVTEVEALVQ AVEKLGTGRW  600
RDVKLRAFDN AKHRTYVDLK DKWKTLVHTA RISPQQRRGE PVPQELLDRV LTAHAFWSQQ  660
QAKQQHKQQQ QPETCLLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	344	KRKYYYKYQRSERLYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-148	MYB_related family protein