PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021653841.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 791aa    MW: 88324.5 Da    PI: 5.0901
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021653841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3665e-1124187881373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+avs++d + a++lL+++++++sp g+ +qRla +f+++L+arla++++++y al+++++s    ++ l+a++++  ++P+ k++ 
  XP_021653841.1 418 LRTLLILCAQAVSADDCRTANELLKQIRQHSSPFGNGTQRLANCFANGLEARLAGTGTQIYTALSSEKAS---AADMLKAYHAYISACPFKKIAI 509
                     5789************************************************************999998...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN  Il a+++ +++HiiDf+i +G+QWp L+  L++R++gpp+lRiTg++ p+sg   +e+++etg+rLak++e  +vpfe+n+ +ak++e+
  XP_021653841.1 510 IFANLSILSAAKEVTTLHIIDFGILYGFQWPGLIYRLSKRAGGPPKLRITGIELPQSGfrPAESVQETGRRLAKYCELHNVPFEYNA-IAKKWET 603
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+++++E +aVn+ ++  +llde+v ++s+r++vL+l+ +++P+++v++  + +++++ F++rf eal ++sal+d+++++++re++ r 
  XP_021653841.1 604 VQVDDLKISSDEFVAVNCLFRFRNLLDETVVVNSPRNTVLNLISKINPDIFVHAIVNGSYSAPFFVTRFREALFHFSALLDMFDVNMSREDQMRL 698
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     k E+e+ gre+ nv+aceg+er+er et+++W+ r ++aG+k++pl+ ++ ++ k+ +++ + + + v+++ ++l++gWk+r L++ SaW
  XP_021653841.1 699 KFEKEFYGREALNVIACEGSERVERPETYKQWHVRNMRAGLKQLPLNPQVLNKLKCKVKTGYHEDFVVDQDGQWLLQGWKGRILYASSAW 788
                     *************************************************************9899************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    
MGTDSRFSGT SGFKFENEIV FPDPDQYPNS TNRFKFNDLS FDMDFDPVDR SLSLPDLDPS  60
KSALSSITSA DGDSPSDDND FSETVLKYIS QMLMEEDMEE KPCMFHDPLA LQAAEKSLYE  120
VLGEKNLSSP NQSSSYGDQF LVDSPDDGFL SSFSDSSSGS NAGISVERRW NGEFGEFKPS  180
FMQTPLPTNF IFKSTANSSS QEPIKLQNVL AGNGNDVMGP SIGKIILPNL FSESELQNGL  240
ARNGNDLMGS SFGKIMVSNP FSESELVLQF QKGVEEASKF LPKVNQLLVD LETVSMPEVK  300
EKGSKVTVKV EKEEREYFPN LIKGKKNHDR DDEDLQEERS NKQSAVYADE SELAEMFDKV  360
LVCTGEECGR PPCIQNDASQ GRPSKTLHQN EQTNGSNSNG GSKSRAKRQG NIKEVVDLRT  420
LLILCAQAVS ADDCRTANEL LKQIRQHSSP FGNGTQRLAN CFANGLEARL AGTGTQIYTA  480
LSSEKASAAD MLKAYHAYIS ACPFKKIAII FANLSILSAA KEVTTLHIID FGILYGFQWP  540
GLIYRLSKRA GGPPKLRITG IELPQSGFRP AESVQETGRR LAKYCELHNV PFEYNAIAKK  600
WETVQVDDLK ISSDEFVAVN CLFRFRNLLD ETVVVNSPRN TVLNLISKIN PDIFVHAIVN  660
GSYSAPFFVT RFREALFHFS ALLDMFDVNM SREDQMRLKF EKEFYGREAL NVIACEGSER  720
VERPETYKQW HVRNMRAGLK QLPLNPQVLN KLKCKVKTGY HEDFVVDQDG QWLLQGWKGR  780
ILYASSAWIP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein