PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654019.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 235aa MW: 27168.1 Da PI: 9.5465

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	78.6	4.5e-25	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+EL +LCdae+ + ifss+gklye++s XP_021654019.1 10 RIDNSASRQVTFSKRRKGLIKKAKELAILCDAEIGLAIFSSSGKLYEFAS 59 8***********************************************86 PP
2	K-box	79.7	7.1e-27	81	170	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e a L+++++nLq+ +R+llGe+L +Ls+k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k + +++en +L kk+ XP_021654019.1 81 NPTSDLKFWQRETAILRQQLHNLQERHRQLLGEQLYDLSVKDLQNLENQLEMSLRGIRMKKEQILTDEIQDLGRKGNLIHQENVELCKKV 170 5678899*******************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELAILCD AEIGLAIFSS SGKLYEFASS 60 SMKSVIERYN KTKEEHQQLL NPTSDLKFWQ RETAILRQQL HNLQERHRQL LGEQLYDLSV 120 KDLQNLENQL EMSLRGIRMK KEQILTDEIQ DLGRKGNLIH QENVELCKKV NLICQENMEL 180 HKKVCGTRDE NATTQTENSF ILYGFNSYES SHIPTHLQLS QPAQPNYETP PKATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-107	MIKC_MADS family protein