PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654291.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 484aa MW: 53747.9 Da PI: 8.0808

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.9	2.1e-17	172	221	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g XP_021654291.1 172 SHYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAFAAARAYDRAAIKFRG 221 79*****************......55**********************997 PP
2	AP2	23	2e-07	264	308	1	49
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 s+y+G + +k grW A+ ++ g rk +lg fg++ eAa+a++ XP_021654291.1 264 SRYRGATLHK-CGRWDARMGHF--HG-RKCMYLGLFGSEVEAARAYDMG 308 789****9.7**9996..23.5******99****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MLDLNLDIIS SESSCDGHHD NNKNKNMVII SRELEKKSIP AEEAASRTQM EDSGTSNSSI 60 IINSEEALTN PGDENSSNSA LIFDILKKEK NDAKHTNNAL KEINPFRDFT TQQLFPEKSG 120 LELDLQSGLS KIRPQWLKLS QMEPSAEAEL RIVQQKQQQM RKSRRGPRSR SSHYRGVTFY 180 RRTGRWESHI WDCGKQVYLG GFDTAFAAAR AYDRAAIKFR GVDADINFNL SDYDEDMKQM 240 KNLSKEEFIL ILRRRSTGIA RGSSRYRGAT LHKCGRWDAR MGHFHGRKCM YLGLFGSEVE 300 AARAYDMGAI TCNGRDAVTN FEPSVYEGEI IFYPSCRGMS DHNLDLSLGI SAPVNDSKAN 360 NNVESAASIP GTVHNLHSLP IASKNLPTLS GIYPGFSPSN QEMVAEKTVG ADSSLKSSSW 420 PWIIKNGNNN GNDFAASSGF ASSATITASS ATFPFNQQQS HSVNNLCLTT PTTTNSFHYY 480 SNRS

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MLDLNLDIIS SESSCDGHHD NNKNKNMVII SRELEKKSIP AEEAASRTQM EDSGTSNSSI  60
IINSEEALTN PGDENSSNSA LIFDILKKEK NDAKHTNNAL KEINPFRDFT TQQLFPEKSG  120
LELDLQSGLS KIRPQWLKLS QMEPSAEAEL RIVQQKQQQM RKSRRGPRSR SSHYRGVTFY  180
RRTGRWESHI WDCGKQVYLG GFDTAFAAAR AYDRAAIKFR GVDADINFNL SDYDEDMKQM  240
KNLSKEEFIL ILRRRSTGIA RGSSRYRGAT LHKCGRWDAR MGHFHGRKCM YLGLFGSEVE  300
AARAYDMGAI TCNGRDAVTN FEPSVYEGEI IFYPSCRGMS DHNLDLSLGI SAPVNDSKAN  360
NNVESAASIP GTVHNLHSLP IASKNLPTLS GIYPGFSPSN QEMVAEKTVG ADSSLKSSSW  420
PWIIKNGNNN GNDFAASSGF ASSATITASS ATFPFNQQQS HSVNNLCLTT PTTTNSFHYY  480
SNRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	5e-82	AP2 family protein