PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654894.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 333aa MW: 36799.6 Da PI: 4.9282

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.7	1e-13	102	153	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P + k+ + a+i +v+YI++Lq XP_021654894.1 102 QRMSHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 153 79*************************9...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MSDTLSDFLE EPEFGDTTLD GDDLFAIFKS LDRVTEFPPV TPSDEVAVSS KESEETTRLV 60 SQKSSSSSAL VESETELETS PKNKRQKTTA SSEEVVNPDV QQRMSHITVE RNRRKQMNEH 120 LSVLRSLMPC FYVKRGDQAS IIGGVVDYIN ELQQVLQSLE AKKQRKVYSE VLSPRLVSSP 180 RPSPLSPRKP PLSPRLNLPI SPRTPQPGSP YRPRLQQGYL SPIIVSSLEP SPTSSSSSIN 240 DNNNELVANS KSAIADVEVK FSGPNLQLKT VSPRIPGQAL KIISALEDLS LEILHVSMST 300 VDETMLNSFT IKIGIECQLS AEELAEKIQQ TFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	114	RMSHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53210.1	1e-101	bHLH family protein