PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654926.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 339aa MW: 38174 Da PI: 8.0245

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.8e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd++l +++++G g+Wkt +++ g++R++k+c++rw++yl XP_021654926.1 16 KGQWTLEEDQKLSAYIQEHGHGSWKTLPARAGLKRCGKSCRLRWNNYL 63 799********************************************7 PP
2	Myb_DNA-binding	51.3	2.8e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ E++ +++++++lG++ W+ Ia +++ +Rt++++k++w+++l XP_021654926.1 69 RGKFSLHEEQTIIQLHALLGNR-WSVIATYLP-KRTDNEIKNHWNSHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MVKTSPYCDH KVELKKGQWT LEEDQKLSAY IQEHGHGSWK TLPARAGLKR CGKSCRLRWN 60 NYLRPDIKRG KFSLHEEQTI IQLHALLGNR WSVIATYLPK RTDNEIKNHW NSHLKKRLHK 120 MGIDPITHKP KVDAFGYGGT YSKGAANLRH IAQWESTRLQ AEARLVRESQ QLIMPSNDSL 180 KARPKCLDVL KAWELIVSGM FSVDGDCKFS GFDDNSAAKI LNGDRRGELP LQGGNNEEEY 240 SNQIQQVEER LGISSKALHE TSTYCSSDNN AWIMESFGAA ENIVEGFRDG LGFDRDSVLM 300 AGDNTNGSSS CGWILEDSRN CWNSLLNLVD ASTSGSLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	4e-89	MYB family protein