PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655025.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARR-B

Protein Properties

Length: 589aa MW: 66436 Da PI: 6.0734

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.7	1.5e-24	200	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fveav+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_021655025.1 200 KARVVWSVDLHQKFVEAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253 68*****************.9*****************************8 PP
2	Myb_DNA-binding	38.5	2.6e-12	202	252	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_021655025.1 202 RVVWSVDLHQKFVEAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 252 678***********************************************7 PP
3	Response_reg	81.3	3.1e-27	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_021655025.1 20 VLVVDDDPTWLKILEKMLRKCSY-EVTTCGLARDALHLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSQVMKGVQHG 112 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_021655025.1 113 ACDYLLKPIRMKELRN 128 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MMDNGFSSPR KDAFPVGLRV LVVDDDPTWL KILEKMLRKC SYEVTTCGLA RDALHLLRER 60 KDGYDIVISD VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSQVMKGVQ HGACDYLLKP 120 IRMKELRNIW QHVFRKKINE VRDIEILEGM ESIQMARNGL DQSNDGYLLC GEDLTSVKKR 180 KDVESKHDDK DPGDNSSTKK ARVVWSVDLH QKFVEAVNQI GFDKVGPKKI LDLMNVPWLT 240 RENVASHLQK YRLYLSRLLK ENDTKISVGG IKHSDSPLGD SANSFGTQNS INIQQNDVSS 300 RSYGFSGNSL LVQNVEPRSH DNERKGIVSK IVAEPKRALT VEVPDPHKPR SSQMEFGHSL 360 TSPASEVNYA EYDSNFPTKF SWWEIPQSRL KQEQKPLHLD DGFSHLTWPG KQQHIQVDYP 420 QPAPPIISGS SVTGRGMGGS VKIKPLYDEC RKNGSQVSST GSTIEASHVQ TKTYKVNHQT 480 FEPISTNTSS LKNQASNLRC ISDLESAQKN INWGMSPFAT LDDDFQVRWV QGDCYAMNLG 540 LENIDFPDYF DRGLLADVPT HLYDAVSFDY QNLYDPTECS LIEQGLFIA

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MMDNGFSSPR KDAFPVGLRV LVVDDDPTWL KILEKMLRKC SYEVTTCGLA RDALHLLRER  60
KDGYDIVISD VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSQVMKGVQ HGACDYLLKP  120
IRMKELRNIW QHVFRKKINE VRDIEILEGM ESIQMARNGL DQSNDGYLLC GEDLTSVKKR  180
KDVESKHDDK DPGDNSSTKK ARVVWSVDLH QKFVEAVNQI GFDKVGPKKI LDLMNVPWLT  240
RENVASHLQK YRLYLSRLLK ENDTKISVGG IKHSDSPLGD SANSFGTQNS INIQQNDVSS  300
RSYGFSGNSL LVQNVEPRSH DNERKGIVSK IVAEPKRALT VEVPDPHKPR SSQMEFGHSL  360
TSPASEVNYA EYDSNFPTKF SWWEIPQSRL KQEQKPLHLD DGFSHLTWPG KQQHIQVDYP  420
QPAPPIISGS SVTGRGMGGS VKIKPLYDEC RKNGSQVSST GSTIEASHVQ TKTYKVNHQT  480
FEPISTNTSS LKNQASNLRC ISDLESAQKN INWGMSPFAT LDDDFQVRWV QGDCYAMNLG  540
LENIDFPDYF DRGLLADVPT HLYDAVSFDY QNLYDPTECS LIEQGLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-136	ARR-B family protein