PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655037.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 295aa MW: 33589.7 Da PI: 8.1384

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.6	2.2e-18	80	132	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe+ +++ e++ +LAk lgL rq+ +WFqNrRa++k XP_021655037.1 80 KKRLNLEQVKALEKSFEMGKKLEPERKMQLAKALGLRPRQIAIWFQNRRARWK 132 4568889*********************************************9 PP
2	HD-ZIP_I/II	129.6	1.3e-41	78	170	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ eqvk+LE+sFe+ +kLeperK++la++Lgl+prq+a+WFqnrRAR+ktkqlEkdye+Lk+++d+lk++n++L++++++L++el++ XP_021655037.1 78 EKKKRLNLEQVKALEKSFEMGKKLEPERKMQLAKALGLRPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFDSLKADNDALHAQNKKLHAELMA 170 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MAFPPHHHGF IFHSQEDNGH LPSPSSLNSL PSSCPPQLFP GAGGHFMMRR SMSFSGLEKR 60 EEVHGDDDLS DDGSQIGEKK KRLNLEQVKA LEKSFEMGKK LEPERKMQLA KALGLRPRQI 120 AIWFQNRRAR WKTKQLEKDY EVLKKQFDSL KADNDALHAQ NKKLHAELMA LRSTESNCIE 180 VNPKKETDKG SWSNASENSR DANLDISRTP VATSPISNSQ LSTKQFFSTS IRPTSMTQLL 240 QISSSRPDLG LKVDQLVQEE NFCNMFNGME EQQGFWSWQE QHAPFSLNQT QFSNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	135	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01220.1	1e-77	HD-ZIP family protein