PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655116.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 202aa MW: 23180.4 Da PI: 7.44

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	1e-18	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+++++ G ++Wkt+a + g++R++k+c++rw++yl XP_021655116.1 20 RGAWTAEEDRKLAEYIEVNGAKRWKTVAMKAGLNRCGKSCRLRWLNYL 67 89********************************************97 PP
2	Myb_DNA-binding	52.9	8.5e-17	73	118	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_021655116.1 73 RGNISDEEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 118 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MLMAPMNSLA STNSKMVMNR GAWTAEEDRK LAEYIEVNGA KRWKTVAMKA GLNRCGKSCR 60 LRWLNYLRPN IKRGNISDEE EDLILRLHKL LGNRWSLIAG RLPGRTDNEI KNYWNSHLSK 120 KINKKEKKPE SSIPLESIPE KTCDTAAAAH EMMEEGRQGA AIPELSFDVN EFFDFSTEGS 180 YGLEWVNKFL ELDEDPWLTE KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	8e-52	MYB family protein