PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655128.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 197aa MW: 23019.3 Da PI: 9.2336

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.4	1.6e-20	7	66	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Leel+++ ++p+a+++++++++l +++ ++V++WFqN++a++++ XP_021655128.1 7 SRWCPTPEQLMILEELYRRgIKTPNASQIQRITAHLslygNIEGKNVFYWFQNHKARDRQ 66 7***************99***********************************996 PP
2	Wus_type_Homeobox	118.1	4.1e-38	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+PtpeQ++iLeely++G++tPn+++iqrita+L+ yG+ie+kNVfyWFQN+kaR+rqk XP_021655128.1 5 TSSRWCPTPEQLMILEELYRRGIKTPNASQIQRITAHLSLYGNIEGKNVFYWFQNHKARDRQK 67 689***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MSPATSSRWC PTPEQLMILE ELYRRGIKTP NASQIQRITA HLSLYGNIEG KNVFYWFQNH 60 KARDRQKLKR NLIKQQQLQY QLYHPDLHYL QQNQSNHHYP ILNYFDPPPP PPHTSSPLYS 120 LSYHKSPAFP PQEGLEGAPA QMMMNHPWKV DIPFISSIRP LETLELFPIT ATNFKEECKD 180 NNKISPKLIS TDHFLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	9e-41	WOX family protein