PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655140.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 402aa MW: 43574.6 Da PI: 8.5901

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80.5	1.5e-25	148	191	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_021655140.1 148 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 191 79***************************************987 PP
2	QLQ	49.7	1.1e-17	80	116	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ Q+q+L+ Q+l+y+y++a++ vPpeLlq i+k XP_021655140.1 80 SYFSLVQWQELELQALIYRYMLAGAAVPPELLQSIKK 116 78********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MDFHLKPWRT EQLESEEQHS AKMPKLLMDS HQPQLHYSSG STAPLPLFVP ESNSKISNLS 60 AFPDSTPAAA TTRFPRMGGS YFSLVQWQEL ELQALIYRYM LAGAAVPPEL LQSIKKSLLH 120 SPPYFLHHPL QQYSYYQPAW YWGRAAMDPE PGRCRRTDGK KWRCSRDVVA GQKYCERHVH 180 RGRNRSRKPV EIPTPTSSST ATTSVGIGGE GAGAAAAAAF NSTASIVAPP LAAVPIGASF 240 SFSGQSPSTD LLHLSNGSMD SKPEIKGLFG PQNEFANRRD GHILRHFFDD WPRSLQQPDT 300 AGSNASPMNS ATCLSISMSG NSSSDVSLKL STGNGEESAG NGRNEREHPQ VNWTGGWGTT 360 QVASMGGPLA EALRSSTSNS SPTSVLHQLP RGSASETSYV ST

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MDFHLKPWRT EQLESEEQHS AKMPKLLMDS HQPQLHYSSG STAPLPLFVP ESNSKISNLS  60
AFPDSTPAAA TTRFPRMGGS YFSLVQWQEL ELQALIYRYM LAGAAVPPEL LQSIKKSLLH  120
SPPYFLHHPL QQYSYYQPAW YWGRAAMDPE PGRCRRTDGK KWRCSRDVVA GQKYCERHVH  180
RGRNRSRKPV EIPTPTSSST ATTSVGIGGE GAGAAAAAAF NSTASIVAPP LAAVPIGASF  240
SFSGQSPSTD LLHLSNGSMD SKPEIKGLFG PQNEFANRRD GHILRHFFDD WPRSLQQPDT  300
AGSNASPMNS ATCLSISMSG NSSSDVSLKL STGNGEESAG NGRNEREHPQ VNWTGGWGTT  360
QVASMGGPLA EALRSSTSNS SPTSVLHQLP RGSASETSYV ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	2e-95	GRF family protein