PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655264.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 362aa MW: 40407.4 Da PI: 6.966

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	3.9e-12	186	232	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_021655264.1 186 DHILAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYMKQLQ 232 5899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MDIASSRWFT EQELDDYNLI HEYNINYLDE LTTQNLATAL GENLHSSFSS ESYSSYPPFN 60 TKNTTTATAN TTTLSGSSIE TSQTSSERPN KLHKTNSWNS SMITTEHKSP RPSNTPQILS 120 FESSSVSAPA NSQQFFMNLD STTVKPKDEA ASPRNMHFQP LISKARQGTT NKRPYSITRT 180 PSHAQDHILA ERKRREKLSQ RFIALSAIVP GLKKMDKASV LGDAIKYMKQ LQERVKLLEE 240 QTKKRTVESV VLVKKSQLSA DDDSSSCDEN SDGGSDSALP EIEARVSDKD VLIRIHCDKQ 300 QGIVPKILNE VENLNLSIIN SSVLPFGNST LDITIIAQME AEISMVVKDL VKNLRVAFLK 360 FM

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MDIASSRWFT EQELDDYNLI HEYNINYLDE LTTQNLATAL GENLHSSFSS ESYSSYPPFN  60
TKNTTTATAN TTTLSGSSIE TSQTSSERPN KLHKTNSWNS SMITTEHKSP RPSNTPQILS  120
FESSSVSAPA NSQQFFMNLD STTVKPKDEA ASPRNMHFQP LISKARQGTT NKRPYSITRT  180
PSHAQDHILA ERKRREKLSQ RFIALSAIVP GLKKMDKASV LGDAIKYMKQ LQERVKLLEE  240
QTKKRTVESV VLVKKSQLSA DDDSSSCDEN SDGGSDSALP EIEARVSDKD VLIRIHCDKQ  300
QGIVPKILNE VENLNLSIIN SSVLPFGNST LDITIIAQME AEISMVVKDL VKNLRVAFLK  360
FM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	196	ERKRRE
2	192	197	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-63	bHLH family protein