PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655271.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 1103aa MW: 125015 Da PI: 7.1985

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.7	4.6e-24	243	328	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YAk +GF vrk k ++s ng+i +r f Cskeg+r++++ + + ++ +r+etrtgC+a+++ + e +gkw+++++++eHnH+l XP_021655271.1 243 EFYKKYAKGIGFIVRKGKVRRS-SNGSIRERFFFCSKEGFRSKKQVN-KITKFKRKETRTGCRARIRCTVE-NGKWVISQFSQEHNHQL 328 6*****************99.8899*************999.99999*************9.**************9 PP
2	Homeobox	52.9	6.3e-17	916	970	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_021655271.1 916 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 970 678899***********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1103 aa Download sequence
MPKFCLNWSQ FSLLLFSTLF LPISLFHNPA TIFLFCFSNP MAETSNSVTG AAASSNSDLS 60 HGVDQDSIMN YWCDIYSSSQ DELAGPSILD HEWGYVFGSP SPKTKKRKKK DVGSTSTVYS 120 TSDLSESLSA ISAHLSLSSS GSSSGDGDQD QDIEKEVAGL MKNHVGILQD KKLDNSMDIF 180 PSFEFDVHSL SSESDEDDSL SSNTNEDEIQ ALSTFILREG TQKDHFQVPE LGMVFSSDDE 240 AYEFYKKYAK GIGFIVRKGK VRRSSNGSIR ERFFFCSKEG FRSKKQVNKI TKFKRKETRT 300 GCRARIRCTV ENGKWVISQF SQEHNHQLDG FSKTSEPHLS LPTKNEATVA KDARATKCFE 360 FGSTYVHEKK INSLQPEDAQ SLINYFRHMQ VEDPSFFYAV QLDANGCMTN FFWTDGRSKI 420 DYEYFGDVLI LDTTFKMDKF EMICAPFWGL NHHQQYVLFG CAFLLDESID SFCWLFETFM 480 EAMRRCQPKT IFTDEGQPVG DAVKMVMPEA KHQLGLWYVR RNASKYLPTY YVQPRFESLF 540 NKCISDCHTE EEFESTWSSL LEQFDLHKNH WLNTLYKSRV RWAYIFNKES FCAGIRCSDN 600 IKSIFQNLMG ETITLQMFVQ QYFKAAEQQR REELYEDFHC NESVPEMTLD YGLVEKHAAG 660 IYTHTVFTAF QKELHKVLSV ALREISSNGP VSIFQLTEVG LKKSTVEYNC VNSSIVCSCK 720 KYESVGVLCA HTLKVLNARN VIHIPPQYIL KRWTKSAKDG VVADLYGQEM ADKRQQAVHL 780 LMRKALNVIT KGVSVNESQN IVDNCLDMAL KRVEGVLKTK SRNDLKTTEV HYEHNNGEAA 840 STDGLGRRFD VNWMSAEGAE KGAVLSSPNG ALSSFQMDFG IRSSGGGRCN KRDMETIEAE 900 RASSRASDDE ENGLTRKKLR LSKEQSAFLE ESFKEHNTLN PKQKLALAKQ LNLRPRQVEV 960 WFQNRRARTK LKQTEVDCEY LKRCCETLTE ENRRLQKELQ ELRALKTSQS FYMQLPATTL 1020 TMCPSCERVA TTTTFSSGTT THTTNTTNNI NNPVATTAAA ATIPSSTTTS NTNSTSLSLA 1080 KPLLYPFTAK VHMHQAQAHQ AAS

Sequence ? help Back to Top

Protein Sequence Length: 1103 aa Download sequence

MPKFCLNWSQ FSLLLFSTLF LPISLFHNPA TIFLFCFSNP MAETSNSVTG AAASSNSDLS  60
HGVDQDSIMN YWCDIYSSSQ DELAGPSILD HEWGYVFGSP SPKTKKRKKK DVGSTSTVYS  120
TSDLSESLSA ISAHLSLSSS GSSSGDGDQD QDIEKEVAGL MKNHVGILQD KKLDNSMDIF  180
PSFEFDVHSL SSESDEDDSL SSNTNEDEIQ ALSTFILREG TQKDHFQVPE LGMVFSSDDE  240
AYEFYKKYAK GIGFIVRKGK VRRSSNGSIR ERFFFCSKEG FRSKKQVNKI TKFKRKETRT  300
GCRARIRCTV ENGKWVISQF SQEHNHQLDG FSKTSEPHLS LPTKNEATVA KDARATKCFE  360
FGSTYVHEKK INSLQPEDAQ SLINYFRHMQ VEDPSFFYAV QLDANGCMTN FFWTDGRSKI  420
DYEYFGDVLI LDTTFKMDKF EMICAPFWGL NHHQQYVLFG CAFLLDESID SFCWLFETFM  480
EAMRRCQPKT IFTDEGQPVG DAVKMVMPEA KHQLGLWYVR RNASKYLPTY YVQPRFESLF  540
NKCISDCHTE EEFESTWSSL LEQFDLHKNH WLNTLYKSRV RWAYIFNKES FCAGIRCSDN  600
IKSIFQNLMG ETITLQMFVQ QYFKAAEQQR REELYEDFHC NESVPEMTLD YGLVEKHAAG  660
IYTHTVFTAF QKELHKVLSV ALREISSNGP VSIFQLTEVG LKKSTVEYNC VNSSIVCSCK  720
KYESVGVLCA HTLKVLNARN VIHIPPQYIL KRWTKSAKDG VVADLYGQEM ADKRQQAVHL  780
LMRKALNVIT KGVSVNESQN IVDNCLDMAL KRVEGVLKTK SRNDLKTTEV HYEHNNGEAA  840
STDGLGRRFD VNWMSAEGAE KGAVLSSPNG ALSSFQMDFG IRSSGGGRCN KRDMETIEAE  900
RASSRASDDE ENGLTRKKLR LSKEQSAFLE ESFKEHNTLN PKQKLALAKQ LNLRPRQVEV  960
WFQNRRARTK LKQTEVDCEY LKRCCETLTE ENRRLQKELQ ELRALKTSQS FYMQLPATTL  1020
TMCPSCERVA TTTTFSSGTT THTTNTTNNI NNPVATTAAA ATIPSSTTTS NTNSTSLSLA  1080
KPLLYPFTAK VHMHQAQAHQ AAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	109	KKRKK
2	915	921	TRKKLRL
3	965	973	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-98	FAR1 family protein