PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021655340.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family AP2
Protein Properties Length: 144aa    MW: 16022 Da    PI: 10.4051
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021655340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.7e-1576135155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GV++++++gr++A+++d  s+n    k+ k+++lg ++ ++ Aa+a++ a++k++g
  XP_021655340.1  76 SRFRGVSRHRWTGRYEAHLWDkASWNPtqrKKgKQVYLGAYDEEDSAARAYDLAALKYWG 135
                     789******************887854556447**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MEMASGNSQV GSTAAAAGSR TLCMIKGDVM EIKCIKRRRR DPSLAAPLRS NEHELGHQQQ  60
GDQTAAAAAT TVKRSSRFRG VSRHRWTGRY EAHLWDKASW NPTQRKKGKQ VYLGAYDEED  120
SAARAYDLAA LKYWGSSTFT NFPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102110PTQRKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.35e-35AP2 family protein