PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655382.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 356aa MW: 41116.1 Da PI: 9.9714

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.1e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl XP_021655382.1 4 RQRWRAEEDALLRAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	37	7.8e-12	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l v++ +++G++ Wk+Ia++++ gRt+k + +w + XP_021655382.1 59 KGSLTEEEQRLVVRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MKERQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV VRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNRTVEP 120 IDEGKYDRIL ETFAEKLVKE RPTPTFVMAT SNGGFLHTDP PAPATTLLPP WLSTSNCASS 180 GRPPSPSVTL SLSPSTVVAP PPIPWLQPER GQDNTAFVIG SLPPHGSVPA CENLMISELM 240 ECCKELEEGH RALAAHKKEA AWRLRRVELQ LESEKSSRRR EKMEEIESKI KALREEQKAS 300 LDRIEAEYRE QLAELRRDAE TKEQKLAEQW AAKHLRFSKF LEQMVCRPRL AEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MKERQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV VRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNRTVEP  120
IDEGKYDRIL ETFAEKLVKE RPTPTFVMAT SNGGFLHTDP PAPATTLLPP WLSTSNCASS  180
GRPPSPSVTL SLSPSTVVAP PPIPWLQPER GQDNTAFVIG SLPPHGSVPA CENLMISELM  240
ECCKELEEGH RALAAHKKEA AWRLRRVELQ LESEKSSRRR EKMEEIESKI KALREEQKAS  300
LDRIEAEYRE QLAELRRDAE TKEQKLAEQW AAKHLRFSKF LEQMVCRPRL AEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-139	MYB family protein