PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655432.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 538aa MW: 58332 Da PI: 6.5856

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48	3.2e-15	171	230	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021655432.1 171 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 230 57*****************666664477446***********************98 PP
2	AP2	36.2	1.5e-11	262	307	7	55
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021655432.1 262 RRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 307 899*******988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MNVDSSQTQN WLGFSLSSHH HMNMSIPSSD TSQLCFFEAF NSTTAPVSVV DRAQEEDATA 60 GNTVTDLSIF TRTGPKLEDF LGCSTTAPPP QPPQPPPLPQ AICQFHTETP VTTASDTSEI 120 YDSELKTIAA SFLRGFSSTT DQTDTTQKQT PLAQTESAPR KTVDTFGQRT SIYRGVTRHR 180 WTGRYEAHLW DNSCRREGQS RKGRQVYLGG YDKEEKAARA YDLAALKYWG PTTTTNFPIS 240 NYQKELEEMK HMTRQEFVAS LRRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI 300 AAIKFRGLNA VTNFDMSRYD VKSIANSNLP IGGISNKSKN SLDSASDSKS IDGCRSADDR 360 DLSSASSVTF ASQPPATSAL SFALPIKQDP SDYWSNILGC QRGTSTSSSL NSIGKSTNSN 420 VAQSVLFQSS TNFPSTTAFS MDFNNGSSTV NESNNNGLLF SGGYLQQQSG GVSGGGGGGI 480 STNSSSSVPF ATPVALNISG SSYEGNSSYG SWIAQSLHSF QSAKPNLSMF QTPIFGME

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MNVDSSQTQN WLGFSLSSHH HMNMSIPSSD TSQLCFFEAF NSTTAPVSVV DRAQEEDATA  60
GNTVTDLSIF TRTGPKLEDF LGCSTTAPPP QPPQPPPLPQ AICQFHTETP VTTASDTSEI  120
YDSELKTIAA SFLRGFSSTT DQTDTTQKQT PLAQTESAPR KTVDTFGQRT SIYRGVTRHR  180
WTGRYEAHLW DNSCRREGQS RKGRQVYLGG YDKEEKAARA YDLAALKYWG PTTTTNFPIS  240
NYQKELEEMK HMTRQEFVAS LRRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI  300
AAIKFRGLNA VTNFDMSRYD VKSIANSNLP IGGISNKSKN SLDSASDSKS IDGCRSADDR  360
DLSSASSVTF ASQPPATSAL SFALPIKQDP SDYWSNILGC QRGTSTSSSL NSIGKSTNSN  420
VAQSVLFQSS TNFPSTTAFS MDFNNGSSTV NESNNNGLLF SGGYLQQQSG GVSGGGGGGI  480
STNSSSSVPF ATPVALNISG SSYEGNSSYG SWIAQSLHSF QSAKPNLSMF QTPIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-135	AP2 family protein