PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655592.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 363aa MW: 40432.3 Da PI: 7.5335

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.6e-12	184	231	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK +Ka++L A++Y+k+Lq XP_021655592.1 184 QDHIIAERKRREKLSQRFIALSAIVPGL-----KKTDKASVLGDAIKYLKQLQ 231 6799**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MLRAASLIGS FQAFFPMEIS SISGLTELEM EEPSFIDQWP MNSIDDLSLL PLVSAFGENM 60 QHSLSHHPTF NLKSSMEASP NTMGTVRPSK QLKPNGFNSS KTTDYNLPNP QAAFSPNILS 120 FANCTNPYQM GMVKPEEEAV CFKNINTLPS DTLVSPGNQN YMFKACKGSK RISTNNSSRH 180 SQTQDHIIAE RKRREKLSQR FIALSAIVPG LKKTDKASVL GDAIKYLKQL QERVNTLEEE 240 TKKKTMESAV IVKKSQLLFC EDENSSSDET FSEGSVDKPL PEIEARICDK QVLVRIHCDK 300 RKGVLEKTVA EIEKLHLTVV NGSVLSFGNS ALVVTIISQM DNEFGMSVKD LVKNLHSAFK 360 LFM

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MLRAASLIGS FQAFFPMEIS SISGLTELEM EEPSFIDQWP MNSIDDLSLL PLVSAFGENM  60
QHSLSHHPTF NLKSSMEASP NTMGTVRPSK QLKPNGFNSS KTTDYNLPNP QAAFSPNILS  120
FANCTNPYQM GMVKPEEEAV CFKNINTLPS DTLVSPGNQN YMFKACKGSK RISTNNSSRH  180
SQTQDHIIAE RKRREKLSQR FIALSAIVPG LKKTDKASVL GDAIKYLKQL QERVNTLEEE  240
TKKKTMESAV IVKKSQLLFC EDENSSSDET FSEGSVDKPL PEIEARICDK QVLVRIHCDK  300
RKGVLEKTVA EIEKLHLTVV NGSVLSFGNS ALVVTIISQM DNEFGMSVKD LVKNLHSAFK  360
LFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	195	ERKRRE
2	191	196	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-62	bHLH family protein