PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655593.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 347aa MW: 38694.2 Da PI: 7.2067

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.5e-12	168	215	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK +Ka++L A++Y+k+Lq XP_021655593.1 168 QDHIIAERKRREKLSQRFIALSAIVPGL-----KKTDKASVLGDAIKYLKQLQ 215 6799**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEISSISGLT ELEMEEPSFI DQWPMNSIDD LSLLPLVSAF GENMQHSLSH HPTFNLKSSM 60 EASPNTMGTV RPSKQLKPNG FNSSKTTDYN LPNPQAAFSP NILSFANCTN PYQMGMVKPE 120 EEAVCFKNIN TLPSDTLVSP GNQNYMFKAC KGSKRISTNN SSRHSQTQDH IIAERKRREK 180 LSQRFIALSA IVPGLKKTDK ASVLGDAIKY LKQLQERVNT LEEETKKKTM ESAVIVKKSQ 240 LLFCEDENSS SDETFSEGSV DKPLPEIEAR ICDKQVLVRI HCDKRKGVLE KTVAEIEKLH 300 LTVVNGSVLS FGNSALVVTI ISQMDNEFGM SVKDLVKNLH SAFKLFM

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEISSISGLT ELEMEEPSFI DQWPMNSIDD LSLLPLVSAF GENMQHSLSH HPTFNLKSSM  60
EASPNTMGTV RPSKQLKPNG FNSSKTTDYN LPNPQAAFSP NILSFANCTN PYQMGMVKPE  120
EEAVCFKNIN TLPSDTLVSP GNQNYMFKAC KGSKRISTNN SSRHSQTQDH IIAERKRREK  180
LSQRFIALSA IVPGLKKTDK ASVLGDAIKY LKQLQERVNT LEEETKKKTM ESAVIVKKSQ  240
LLFCEDENSS SDETFSEGSV DKPLPEIEAR ICDKQVLVRI HCDKRKGVLE KTVAEIEKLH  300
LTVVNGSVLS FGNSALVVTI ISQMDNEFGM SVKDLVKNLH SAFKLFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	174	179	ERKRRE
2	175	180	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-62	bHLH family protein