PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655894.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 1751aa MW: 196791 Da PI: 5.396

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.3	1.3e-18	29	85	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++++ + yps+++r++L++klgL++rq ++WF+ rR k+kk XP_021655894.1 29 RPKRQMKTPFQLEALEKAYALEAYPSEAMRADLSQKLGLSDRQLQMWFCHRRLKDKK 85 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1751 aa Download sequence
MESNSEGENQ NRGSSANNNI GNSNEGHSRP KRQMKTPFQL EALEKAYALE AYPSEAMRAD 60 LSQKLGLSDR QLQMWFCHRR LKDKKETPAK KPRKAVPLES PVEEMRAMAP EPEPEPGSDY 120 GSGSGSGSSP FMEPRKVSLD DMPMIRRYYE SSPQSVMELR AIACVEAQLG EPLREDGPIL 180 GMEFDPLPPD AFGAPIAMAE QQKRPMHSYA GEVYERHDAK SSKVSARAFH EYQFLQDQSS 240 IRSDAYGQVD QSPYRDPSVD IPRGKASIIH EDEPLAKVQG VRHLSQPDKK GHALSSLHRD 300 DDYLLHHESV TNNRIGAHST VHQIMGSQNP DIFPDAQIFH TDTDLRIGKK CKNDEARITR 360 EVEARENQIR KELEKQDQLR RKSEERMRKE MEKQERERRK EEDRLIRERQ REEERSLREQ 420 KRELERREKF LQKEYLRAEK KRQKEELRRE KEAVKRQAAI EKATARRIAK ESLDLIEDEQ 480 LELMELAAAS KGLTSVVHLN YDTLQNLDSF RDSLSIFPPE SIQLKKPFAI QPWMDSEENI 540 GNLLMVWKFF ITFADVLGLW PFTLDEFVQA FHDYDSRLLG EVHLALLKLI IKDIEDVART 600 PSTGLGANQY CAANPEGGHL QIVEGAYIWG FDIRNWQRHL NPLTWPEIFR QLALSAGFGP 660 RLKKRSSTRT YLGDNDEVKG CEDTISTLRN GSAAENAFSL MRERGLLLPR RSRHRLTPGT 720 VKFAAFHVLS LEGSKGLTVL ELADKIQKSG LRDLTTSKTP EASISVALTR DQKLFERIAP 780 STYCLRAAYR KDPADAEAIL SAARKKIRIF ENGFSGGEDV DDVERDEDSE GDIDEDPEVD 840 DLTTPLSANR SADHSIEANT CSGSGKDNLC NGIPLIAQNE LVKEPSSIHL NGPKDAKTPS 900 STEQCVPHED VGVRNVDQEN IEIDESKSGE SWIQGLAEGE YAHLSVEERL NSLVALVGIA 960 NEGNTIRAVL EDRLEAANAL KKQMWAEAQL DRSRLKEDIV SKLDFPSFIG GKAEIQVTSS 1020 VVEGGQSPLP LDDSKNKEAS PSTAVDQKPL PASRNVQNHH NSVPTEKTLM VQDLSVNPDN 1080 FSSQQHGYAS KRSRSQLKAY IGHIAEETYV YRSLPLGQDR RHNRYWQFVA SASKNDPCSG 1140 RIFVELHDGN WRLIDSEEAF DALLSSLDTR GIRESHLRIM LQKIEKSFKQ NVRRNFQSEN 1200 IVCQNGIAAE NEVGEADSSP NCSAGIGSPS SMVCGSSSDA LDTSSLFRIE LGRNEMEQKG 1260 AMKRYQDFQK WTWKECFNSL TLCAMKYGKK RCSQLLTTCD VCFDSYLAED SDSVSCHQTL 1320 NAADKSFNFL EHGIQCKVKR KLDPGVCDTS LPLGIRLLKA LLAFIEASVP PEARESFWIE 1380 NHRKTWATKL NMSSSTEELL QILTVLESAI KRDYLSANFE MTKELLGSAT SAQSALYGST 1440 DLGSVPVLPW IPKTTAAVAL RLFELDGSVA YIQHEKAELS EDKPVKVYML PSRYSPLKNK 1500 EIELKGLRQH EHVKEEHLTD LRSKRSSYKR GRGGRDQGYA TKWQRRVPGL KSYSNRRNVR 1560 ETGKFNLGSK QGRRTNAKSS GRGLRTVRRR RVEMMVAEEP LIGRMTSTVG PRSYGGSLRN 1620 LGEENWGAEK VRTDADVGMD VDVDVDVDVD LDDADNNSVE AGESDDNVEA EGYEQRNWEQ 1680 SFNGASNRWN RTVMEVSDDD GDASGDDNGI EEMGAEESEG DIEISEGSDG VGNKIENEEG 1740 TDSAVSDFSS D

Sequence ? help Back to Top

Protein Sequence Length: 1751 aa Download sequence

MESNSEGENQ NRGSSANNNI GNSNEGHSRP KRQMKTPFQL EALEKAYALE AYPSEAMRAD  60
LSQKLGLSDR QLQMWFCHRR LKDKKETPAK KPRKAVPLES PVEEMRAMAP EPEPEPGSDY  120
GSGSGSGSSP FMEPRKVSLD DMPMIRRYYE SSPQSVMELR AIACVEAQLG EPLREDGPIL  180
GMEFDPLPPD AFGAPIAMAE QQKRPMHSYA GEVYERHDAK SSKVSARAFH EYQFLQDQSS  240
IRSDAYGQVD QSPYRDPSVD IPRGKASIIH EDEPLAKVQG VRHLSQPDKK GHALSSLHRD  300
DDYLLHHESV TNNRIGAHST VHQIMGSQNP DIFPDAQIFH TDTDLRIGKK CKNDEARITR  360
EVEARENQIR KELEKQDQLR RKSEERMRKE MEKQERERRK EEDRLIRERQ REEERSLREQ  420
KRELERREKF LQKEYLRAEK KRQKEELRRE KEAVKRQAAI EKATARRIAK ESLDLIEDEQ  480
LELMELAAAS KGLTSVVHLN YDTLQNLDSF RDSLSIFPPE SIQLKKPFAI QPWMDSEENI  540
GNLLMVWKFF ITFADVLGLW PFTLDEFVQA FHDYDSRLLG EVHLALLKLI IKDIEDVART  600
PSTGLGANQY CAANPEGGHL QIVEGAYIWG FDIRNWQRHL NPLTWPEIFR QLALSAGFGP  660
RLKKRSSTRT YLGDNDEVKG CEDTISTLRN GSAAENAFSL MRERGLLLPR RSRHRLTPGT  720
VKFAAFHVLS LEGSKGLTVL ELADKIQKSG LRDLTTSKTP EASISVALTR DQKLFERIAP  780
STYCLRAAYR KDPADAEAIL SAARKKIRIF ENGFSGGEDV DDVERDEDSE GDIDEDPEVD  840
DLTTPLSANR SADHSIEANT CSGSGKDNLC NGIPLIAQNE LVKEPSSIHL NGPKDAKTPS  900
STEQCVPHED VGVRNVDQEN IEIDESKSGE SWIQGLAEGE YAHLSVEERL NSLVALVGIA  960
NEGNTIRAVL EDRLEAANAL KKQMWAEAQL DRSRLKEDIV SKLDFPSFIG GKAEIQVTSS  1020
VVEGGQSPLP LDDSKNKEAS PSTAVDQKPL PASRNVQNHH NSVPTEKTLM VQDLSVNPDN  1080
FSSQQHGYAS KRSRSQLKAY IGHIAEETYV YRSLPLGQDR RHNRYWQFVA SASKNDPCSG  1140
RIFVELHDGN WRLIDSEEAF DALLSSLDTR GIRESHLRIM LQKIEKSFKQ NVRRNFQSEN  1200
IVCQNGIAAE NEVGEADSSP NCSAGIGSPS SMVCGSSSDA LDTSSLFRIE LGRNEMEQKG  1260
AMKRYQDFQK WTWKECFNSL TLCAMKYGKK RCSQLLTTCD VCFDSYLAED SDSVSCHQTL  1320
NAADKSFNFL EHGIQCKVKR KLDPGVCDTS LPLGIRLLKA LLAFIEASVP PEARESFWIE  1380
NHRKTWATKL NMSSSTEELL QILTVLESAI KRDYLSANFE MTKELLGSAT SAQSALYGST  1440
DLGSVPVLPW IPKTTAAVAL RLFELDGSVA YIQHEKAELS EDKPVKVYML PSRYSPLKNK  1500
EIELKGLRQH EHVKEEHLTD LRSKRSSYKR GRGGRDQGYA TKWQRRVPGL KSYSNRRNVR  1560
ETGKFNLGSK QGRRTNAKSS GRGLRTVRRR RVEMMVAEEP LIGRMTSTVG PRSYGGSLRN  1620
LGEENWGAEK VRTDADVGMD VDVDVDVDVD LDDADNNSVE AGESDDNVEA EGYEQRNWEQ  1680
SFNGASNRWN RTVMEVSDDD GDASGDDNGI EEMGAEESEG DIEISEGSDG VGNKIENEEG  1740
TDSAVSDFSS D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	86	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein