PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021656006.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 218aa    MW: 24041.8 Da    PI: 4.8185
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021656006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.41.4e-3971071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC ++Cv+apyf+ +q + +fa+vhk+FGasnv+kll +lp ++r+da+ ++ yeA ar+rdPvyG+v++i++lqqq+++l++e+
  XP_021656006.1   7 SCGACKFLRRKCMSECVFAPYFCYDQaATHFAAVHKVFGASNVSKLLLHLPVQNRSDAAITISYEALARMRDPVYGCVAHIFALQQQIASLQEEI 101
                     6************************9789****************************************************************** PP

          DUF260  95 allkee 100
                     + l+++
  XP_021656006.1 102 EILGHQ 107
                     *99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MIGPGSSCGA CKFLRRKCMS ECVFAPYFCY DQAATHFAAV HKVFGASNVS KLLLHLPVQN  60
RSDAAITISY EALARMRDPV YGCVAHIFAL QQQIASLQEE IEILGHQMAS LTVGIASHGS  120
SQTTSTPNCE IQISSLQDAI NMKYYENQSA AQVNNSGYAT GNQASDSQMD AQLPPFYEWE  180
HQNPSCESHP NSLDRLLEEV EQEIFPYCSW FDSGNNAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.17e-60LBD family protein