PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656216.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 349aa MW: 39394.5 Da PI: 6.9244

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.5	1e-15	43	102	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_021656216.1 43 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 102 57*****************999955656446***********************98 PP
2	AP2	51.3	2.9e-16	145	196	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_021656216.1 145 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 196 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAKISKQSQR NNTAANTSTN PSTTKTKRTR KTVPRDSPPQ RSSIYRGVTR HRWTGRYEAH 60 LWDKNCWNES QNKKGRQVYL GAYDDEEAAA HAYDLAALKY WGQDTILNFP LSTYQEELKD 120 MEGQSKEEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ 180 EEAATAYDMA AIEYRGLNAV TNFDLSRYIK WLRPDTQNDP CQETNTGSDA NFIANPTQDL 240 GLSFTSHQQS SSPTENTMPD PPRPCGGSAS SALGLLLQST KFKEMLDRTS PNDCPLTPPE 300 SEPPRRSFPD DIQTYFDCQD ACSFAEGDDI IFGELNAFAS PIFHCELDC

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAKISKQSQR NNTAANTSTN PSTTKTKRTR KTVPRDSPPQ RSSIYRGVTR HRWTGRYEAH  60
LWDKNCWNES QNKKGRQVYL GAYDDEEAAA HAYDLAALKY WGQDTILNFP LSTYQEELKD  120
MEGQSKEEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ  180
EEAATAYDMA AIEYRGLNAV TNFDLSRYIK WLRPDTQNDP CQETNTGSDA NFIANPTQDL  240
GLSFTSHQQS SSPTENTMPD PPRPCGGSAS SALGLLLQST KFKEMLDRTS PNDCPLTPPE  300
SEPPRRSFPD DIQTYFDCQD ACSFAEGDDI IFGELNAFAS PIFHCELDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-102	AP2 family protein