PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656288.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 755aa MW: 83170.6 Da PI: 7.4736

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.3	2e-15	415	452	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCk+skClk+YCeCfaag++C ++C C++C+N+ XP_021656288.1 415 CKRCNCKRSKCLKLYCECFAAGVYCLDSCACNNCFNRP 452 89**********************************86 PP
2	TCR	49.1	1.2e-15	501	540	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce+C+N+ XP_021656288.1 501 RHKRGCNCKKSKCLKKYCECYQARVGCSNGCRCEGCNNSF 540 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 755 aa Download sequence
MDSPESNRIP AKSSPSPAVQ GSPFFNYISN LSPIRSAKAA RYVHSFSQTN FAIPPPPVFT 60 SPRIDPQRET SFRGEIDAAG SDLYRQSDTH LKPEPIHCFQ KEDQSCSPSG CIDEYLADLV 120 DMEDTTKSSD LCAQSRNDKP MILERFTSHK DTINKDYNHV DSHMFLGSFS GSQHHEKFLP 180 QSIETYNDFV DSSRSALRVA AKDAAQHQRG IRRHLQFGVT MSCKDTGNEN HDTNNLSLPE 240 GLTHFGSLVS YHTEPSGISN SWGADSRAQT VTFLSSSCPS QSVIPAENCG NHNISACTPS 300 DLALPSIGVI RSDSMGLDSN ASQKLVDKLH AREEKLIAVR NHSSSKDLDS ILVSSVAGEI 360 YAQVEDDQQE TQAATTVVPY DGRTLTSQNA NMVEDQASPK RNRKRTKCIN ESEGCKRCNC 420 KRSKCLKLYC ECFAAGVYCL DSCACNNCFN RPDYEDTVLD TRQLIEARNP LAFAPKVVKH 480 AMDSPANIVE EGNWTTPSSA RHKRGCNCKK SKCLKKYCEC YQARVGCSNG CRCEGCNNSF 540 GKKIESIYRR AEKWKNPSHE QLGTMETQDD FIKSGRAHQL SSTWEELADM SHLTPLSHCH 600 SGAVATSASL NIGDGSKVSQ AHAYQERTLQ SSAGYPHSHH SPVSPTTNLY RSKVLPDISS 660 DNLLYDILED DTRKILENAL AATKSVKVSS PNQKRVSPPQ IRSQELRSSS SQGLRSGRKF 720 ILPAVPSFPP LTPYSKLKDG IQGSHGDSKD GTSCQ

Sequence ? help Back to Top

Protein Sequence Length: 755 aa Download sequence

MDSPESNRIP AKSSPSPAVQ GSPFFNYISN LSPIRSAKAA RYVHSFSQTN FAIPPPPVFT  60
SPRIDPQRET SFRGEIDAAG SDLYRQSDTH LKPEPIHCFQ KEDQSCSPSG CIDEYLADLV  120
DMEDTTKSSD LCAQSRNDKP MILERFTSHK DTINKDYNHV DSHMFLGSFS GSQHHEKFLP  180
QSIETYNDFV DSSRSALRVA AKDAAQHQRG IRRHLQFGVT MSCKDTGNEN HDTNNLSLPE  240
GLTHFGSLVS YHTEPSGISN SWGADSRAQT VTFLSSSCPS QSVIPAENCG NHNISACTPS  300
DLALPSIGVI RSDSMGLDSN ASQKLVDKLH AREEKLIAVR NHSSSKDLDS ILVSSVAGEI  360
YAQVEDDQQE TQAATTVVPY DGRTLTSQNA NMVEDQASPK RNRKRTKCIN ESEGCKRCNC  420
KRSKCLKLYC ECFAAGVYCL DSCACNNCFN RPDYEDTVLD TRQLIEARNP LAFAPKVVKH  480
AMDSPANIVE EGNWTTPSSA RHKRGCNCKK SKCLKKYCEC YQARVGCSNG CRCEGCNNSF  540
GKKIESIYRR AEKWKNPSHE QLGTMETQDD FIKSGRAHQL SSTWEELADM SHLTPLSHCH  600
SGAVATSASL NIGDGSKVSQ AHAYQERTLQ SSAGYPHSHH SPVSPTTNLY RSKVLPDISS  660
DNLLYDILED DTRKILENAL AATKSVKVSS PNQKRVSPPQ IRSQELRSSS SQGLRSGRKF  720
ILPAVPSFPP LTPYSKLKDG IQGSHGDSKD GTSCQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	6e-63	CPP family protein