PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657048.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 288aa MW: 30997.6 Da PI: 7.9656

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59	1e-18	13	58	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + XP_021657048.1 13 KGPWSPEEDEALQRLVQSYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 58 79****************************.*********985 PP
2	Myb_DNA-binding	54.5	2.8e-17	67	109	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde + +a++++G++ W+tIar ++ gRt++ +k++w++ XP_021657048.1 67 PFSPEEDETITRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 109 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MASTVREVVD RIKGPWSPEE DEALQRLVQS YGPRNWSLIS KSIPGRSGKS CRLRWCNQLS 60 PEVEHRPFSP EEDETITRAH ARFGNKWATI ARLLNGRTDN AIKNHWNSTL KRKCSSFSDD 120 LSDDAPAQQP LKRSASVGAG AVSGLQLNPG SPSGSDISDS SLPGMASSPV YRPLARTGSL 180 GQPGLSIDAA SSTTDPPTYL SLSLPGSDSC EASNQVSVSG SGSGLNQGGN ATHVVQTRVV 240 PPTAVPVQQA VDVQQNGVRF EKQFFSPQFL AMMQEMIREE VGRYMSGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-84	MYB family protein