PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657062.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

YABBY

Protein Properties

Length: 227aa MW: 25457.8 Da PI: 9.0366

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	165.1	5.2e-51	61	212	6	170
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 +se vCyv+CnfCnt lav+vP + f+ vtv+CGhC++lls+ + +l+ + h l++ ++++ ++ e ++s s+s++++ XP_021657062.1 61 ASECVCYVHCNFCNTNLAVNVPGNITFNAVTVKCGHCSNLLSLY----TGALPQNTH--------HLQNVHKQNIFYQYLSEDSRS-SKSNEVSA 142 7899************************************54....344555544........334443333333333333333.33333334 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++++++e p++ v krqr+Psayn+fikeei+r+ka+nP+ish+eafs+aaknWa++P+ fgl XP_021657062.1 143 SDSSSENEHPKTLSVHAAKGKRQRAPSAYNKFIKEEIRRLKANNPNISHKEAFSTAAKNWAYLPHTQFGL 212 46677788999999999*************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MARLYCLLFI YLHKIIHFTQ DSNLSPFSSS IIKLSFNFQD SLLSLVIDLQ FTSRMSLNNI 60 ASECVCYVHC NFCNTNLAVN VPGNITFNAV TVKCGHCSNL LSLYTGALPQ NTHHLQNVHK 120 QNIFYQYLSE DSRSSKSNEV SASDSSSENE HPKTLSVHAA KGKRQRAPSA YNKFIKEEIR 180 RLKANNPNIS HKEAFSTAAK NWAYLPHTQF GLTLNGNVKD IQGQGTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	166	KGKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	6e-46	YABBY family protein