PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657064.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

YABBY

Protein Properties

Length: 186aa MW: 20758.5 Da PI: 8.4886

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	88.3	2e-27	61	179	6	137
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 +se vCyv+CnfCnt lav+vP + f+ vtv+CGhC++lls+ + +l+ + h l++ ++++ ++ e ++s s+s++++ XP_021657064.1 61 ASECVCYVHCNFCNTNLAVNVPGNITFNAVTVKCGHCSNLLSLY----TGALPQNTH--------HLQNVHKQNIFYQYLSEDSRS-SKSNEVSA 142 7899************************************54....344555544........334443333333333333333.33333334 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeei 137 ++++++e p++ v krqr+Psayn+fi i XP_021657064.1 143 SDSSSENEHPKTLSVHAAKGKRQRAPSAYNKFINGHI 179 46677788999999999**************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MARLYCLLFI YLHKIIHFTQ DSNLSPFSSS IIKLSFNFQD SLLSLVIDLQ FTSRMSLNNI 60 ASECVCYVHC NFCNTNLAVN VPGNITFNAV TVKCGHCSNL LSLYTGALPQ NTHHLQNVHK 120 QNIFYQYLSE DSRSSKSNEV SASDSSSENE HPKTLSVHAA KGKRQRAPSA YNKFINGHIS 180 LTPNLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	166	KGKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-19	YABBY family protein