PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021657345.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 200aa    MW: 21740.7 Da    PI: 7.9954
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021657345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601284.2e-4010109199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC k+C++apyf ++q +++fa+vhk+FGasnv+kll ++p ++r+da+ +l+yeA ar+rdPvyG+vg++++lqqq+ +l+ael
  XP_021657345.1  10 PCGACKFLRRKCLKGCIFAPYFDSDQgTAHFAAVHKVFGASNVSKLLLRIPAHKRPDAVVTLCYEALARVRDPVYGCVGHLFTLQQQVVNLQAEL 104
                     7***********************9989******************************************************************* PP

          DUF260  95 allke 99 
                     a++++
  XP_021657345.1 105 AYIQA 109
                     99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MSGANNGGGP CGACKFLRRK CLKGCIFAPY FDSDQGTAHF AAVHKVFGAS NVSKLLLRIP  60
AHKRPDAVVT LCYEALARVR DPVYGCVGHL FTLQQQVVNL QAELAYIQAC LSTLQRLPLQ  120
QAQSLPAPSP SQSSIASTTE LGSNSNVSMH FDQLQQVSSE WTSLCNPLDS ELENDDLQAL  180
ARDFVSRYLP GVRFKPPSSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.12e-60LBD family protein