PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657465.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 387aa MW: 44058.1 Da PI: 8.7373

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69	5.9e-22	82	141	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ XP_021657465.1 82 SRWNPTPEQLRTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 141 7***************99************************************97 PP
2	Wus_type_Homeobox	115.2	3.1e-37	81	143	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_021657465.1 81 SSRWNPTPEQLRTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 143 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MWMMGCSDAG EFNMPDSFNG RKLRPVVPRT PPLPSPNNTS NSSPPRLSLL HGNEFFSLNH 60 HLATMADQSK RDFHTQPVVV SSRWNPTPEQ LRTLEELYRR GTRTPSAEQI QHITAQLRRY 120 GKIEGKNVFY WFQNHKARER QKRRRQMESA ASDHHHEQQQ NRDIEILGRK ESEANRTGYE 180 GEQTKNWAPT TNCSTLPEEA VSMQRAAKGA VAECRGDGWI QFDEVELQQR RSFMERNATW 240 QIKQMSCPSP THLINTSSSS TNTTTTTSRI LAEATAITPT VLARGTIRTM DPNKQIIKTH 300 NDLNIFIAPR REKNIGHGLI NHFISNDEDH NGCGDSHQTL QLFPLRSSGD GERINDKETE 360 TSSASVAAAM NNFTTPYQFF EFLPLKN

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MWMMGCSDAG EFNMPDSFNG RKLRPVVPRT PPLPSPNNTS NSSPPRLSLL HGNEFFSLNH  60
HLATMADQSK RDFHTQPVVV SSRWNPTPEQ LRTLEELYRR GTRTPSAEQI QHITAQLRRY  120
GKIEGKNVFY WFQNHKARER QKRRRQMESA ASDHHHEQQQ NRDIEILGRK ESEANRTGYE  180
GEQTKNWAPT TNCSTLPEEA VSMQRAAKGA VAECRGDGWI QFDEVELQQR RSFMERNATW  240
QIKQMSCPSP THLINTSSSS TNTTTTTSRI LAEATAITPT VLARGTIRTM DPNKQIIKTH  300
NDLNIFIAPR REKNIGHGLI NHFISNDEDH NGCGDSHQTL QLFPLRSSGD GERINDKETE  360
TSSASVAAAM NNFTTPYQFF EFLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-56	WOX family protein