PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657475.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

RAV

Protein Properties

Length: 377aa MW: 42885.7 Da PI: 8.5261

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.3	1.4e-11	73	120	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s+++GV + +g W ++I+ + +r++lg+f +++eAa a++ a++kl+ XP_021657475.1 73 SKFRGVVAHQ-SGHWGCQIYA------NhQRVWLGTFKYEQEAAMAYDSAALKLR 120 79**9898.7**999......44******99**********98 PP
2	B3	84.4	1e-26	196	288	1	85
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+ltpsdv+k++rlv+pkkfa+++ +++ + ++l+++d+ + W+++++y+++s++yv+t+GW++Fvk+++Lk++D++ F l XP_021657475.1 196 FQKELTPSDVGKLNRLVIPKKFATKFfsplsegvQENAADVRQLSFYDKAMKLWKFRYCYWRSSQSYVFTRGWSGFVKEKQLKANDIICFCLY 288 99***************************8775566677789*******************************************9843 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MFTALIVLFG FCGNCFFLLL PPRNRNMSGK DIVSMISSGG TVVIEEVSDS NSSTYPSLAS 60 KHARNDNNNI STSKFRGVVA HQSGHWGCQI YANHQRVWLG TFKYEQEAAM AYDSAALKLR 120 SGDSRRNFPF TNITVEEENF QSSYSTEAVL SMIKVGTYRS KFADFLRTRA QNFEADLSLK 180 LMKTQSSRRL TCKQLFQKEL TPSDVGKLNR LVIPKKFATK FFSPLSEGVQ ENAADVRQLS 240 FYDKAMKLWK FRYCYWRSSQ SYVFTRGWSG FVKEKQLKAN DIICFCLYEC RENSKVTQAY 300 YMIDVNNGGH GHSSSLLELG NERVDMGMEL QLHLGQRCAQ DCMEEENVEG DDGLMVAKPR 360 SEDSHTKSFR LFGAEII

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MFTALIVLFG FCGNCFFLLL PPRNRNMSGK DIVSMISSGG TVVIEEVSDS NSSTYPSLAS  60
KHARNDNNNI STSKFRGVVA HQSGHWGCQI YANHQRVWLG TFKYEQEAAM AYDSAALKLR  120
SGDSRRNFPF TNITVEEENF QSSYSTEAVL SMIKVGTYRS KFADFLRTRA QNFEADLSLK  180
LMKTQSSRRL TCKQLFQKEL TPSDVGKLNR LVIPKKFATK FFSPLSEGVQ ENAADVRQLS  240
FYDKAMKLWK FRYCYWRSSQ SYVFTRGWSG FVKEKQLKAN DIICFCLYEC RENSKVTQAY  300
YMIDVNNGGH GHSSSLLELG NERVDMGMEL QLHLGQRCAQ DCMEEENVEG DDGLMVAKPR  360
SEDSHTKSFR LFGAEII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	1e-89	RAV family protein