PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657625.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 347aa MW: 38010.6 Da PI: 6.3924

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89.5	3.6e-28	43	137	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li++++ e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl+++ykkike+e + ++e++s +++ ++l+ XP_021657625.1 43 RWTRQEILVLIQGKKVAENRVRRGRtagmafgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWETQIREETESFWVMRNDLR 137 8********************97778888888*******************************************99999999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MVLEQQLNLA TNTVHGDPTN VVDNRPPSID GGDDGSKAPR LPRWTRQEIL VLIQGKKVAE 60 NRVRRGRTAG MAFGSGQVEP KWASVSSYCK RHGVNRGPVQ CRKRWSNLAG DYKKIKEWET 120 QIREETESFW VMRNDLRRER KLPGFFDREV YDILDGVGGV SPAAPGLALA LAPSTEPAED 180 VEMVFDSGRS AAAEDGLFSD FEQEEASGSP DKVASAAKEV PPIKAAAAGV AAPVPISEKQ 240 YQPALQADQA QGTTNEKHPA SNPEVGSASH ENRKRKRLTT DGDEETINVQ NQLIDVLEKN 300 GKMLTAQLKA QNTNFQLDRE QRKDHADSLV AVLNKLADAL GKIADKL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MVLEQQLNLA TNTVHGDPTN VVDNRPPSID GGDDGSKAPR LPRWTRQEIL VLIQGKKVAE  60
NRVRRGRTAG MAFGSGQVEP KWASVSSYCK RHGVNRGPVQ CRKRWSNLAG DYKKIKEWET  120
QIREETESFW VMRNDLRRER KLPGFFDREV YDILDGVGGV SPAAPGLALA LAPSTEPAED  180
VEMVFDSGRS AAAEDGLFSD FEQEEASGSP DKVASAAKEV PPIKAAAAGV AAPVPISEKQ  240
YQPALQADQA QGTTNEKHPA SNPEVGSASH ENRKRKRLTT DGDEETINVQ NQLIDVLEKN  300
GKMLTAQLKA QNTNFQLDRE QRKDHADSLV AVLNKLADAL GKIADKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-126	Trihelix family protein