PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657754.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 475aa MW: 53415.7 Da PI: 6.5185

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.9	1.8e-13	300	345	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L Av YIk+L XP_021657754.1 300 NHVEAERQRRERLNHRFYALRSVVPNV-----SKMDKASLLADAVTYIKEL 345 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MEEITSPSST SSFMSFCQET SPPLQQRLQF ILQSRPEWWV YAIFWQASKD ATGRLVLSWG 60 DGHFCGTKEF AAKACNKLNQ PKFGFNLERK MINKESPTLF GDDMDMDRLV DVEVIDYEWF 120 YTVSVTRSFA VEDGILGRTF GSGAFIWLTG NHELQMFGCE RVKEARMHGI QTLACISTTC 180 GVVELGSSNT IDKDWSLVQL CKSLFGGDTA CLVSLEPSHD SHLHILNTSF LDISMFSASQ 240 NETSTEKQIE GDKKKDVTGQ VRSSSDSGRS DSDGNFAAGI TDRFKKRAKK LQNGKELPLN 300 HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLADAVT YIKELKAKVD ELESKLQAVT 360 KKSKNTNVTD NQSTDSLIDQ IRDPSIYKTK AMELEVKIVG SEAMIRFLSP DINYPAARLM 420 DVLREIEFKV HHASMSSIKE MVLQDVVARV PDGLTNEEVV RSTILQRMQN LAASL

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MEEITSPSST SSFMSFCQET SPPLQQRLQF ILQSRPEWWV YAIFWQASKD ATGRLVLSWG  60
DGHFCGTKEF AAKACNKLNQ PKFGFNLERK MINKESPTLF GDDMDMDRLV DVEVIDYEWF  120
YTVSVTRSFA VEDGILGRTF GSGAFIWLTG NHELQMFGCE RVKEARMHGI QTLACISTTC  180
GVVELGSSNT IDKDWSLVQL CKSLFGGDTA CLVSLEPSHD SHLHILNTSF LDISMFSASQ  240
NETSTEKQIE GDKKKDVTGQ VRSSSDSGRS DSDGNFAAGI TDRFKKRAKK LQNGKELPLN  300
HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLADAVT YIKELKAKVD ELESKLQAVT  360
KKSKNTNVTD NQSTDSLIDQ IRDPSIYKTK AMELEVKIVG SEAMIRFLSP DINYPAARLM  420
DVLREIEFKV HHASMSSIKE MVLQDVVARV PDGLTNEEVV RSTILQRMQN LAASL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	311	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	7e-68	bHLH family protein