PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021657772.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LSD
Protein Properties Length: 134aa    MW: 14660.8 Da    PI: 6.7155
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021657772.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD141.22.7e-134569125
         zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                    Cg+Cr lLsYPrGA++V+C++C+ V
  XP_021657772.1 45 CGSCRSLLSYPRGARNVQCSCCQMV 69
                    ***********************98 PP
2zf-LSD143.45.5e-1483107125
         zf-LSD1   1 CggCrtlLsYPrGApsVRCalCdtV 25 
                     Cg C +lL+YP+GA+sVRC++C++V
  XP_021657772.1  83 CGRCAVLLMYPYGASSVRCSSCHFV 107
                     ***********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MEEEKKEVEE GPPPGWQSIP PPGSSQPPPA PLQQPPSSEM AQMVCGSCRS LLSYPRGARN  60
VQCSCCQMVN FVLEAHEVGQ VNCGRCAVLL MYPYGASSVR CSSCHFVTEI GVHNRRPPWS  120
VIQGYPPLPP NPVW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21610.13e-39LSD family protein