PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021657833.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 109aa    MW: 12327.2 Da    PI: 10.4315
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021657833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.22.1e-2853103151
                     S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                     krie+ks rqvtfskR+ g++KKA ELSvLCd+e+a+iifs  gklye+ss
  XP_021657833.1  53 KRIEDKSSRQVTFSKRKGGLMKKARELSVLCDVEIAMIIFSGGGKLYEFSS 103
                     79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MPKPTNMNRR SDGQEGDKKV ESQYTRQLNI ESLKRCFFWL IGGEMGRGKV QLKRIEDKSS  60
RQVTFSKRKG GLMKKARELS VLCDVEIAMI IFSGGGKLYE FSSGDSSTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136ESLKRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61120.13e-27MIKC_MADS family protein