PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021657859.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 842aa    MW: 92010.8 Da    PI: 6.211
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021657859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.54.7e-182583357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_021657859.1 25 KYVRYTAEQVEALERVYTECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                    56789****************************************************97 PP
2START1618.7e-511633702204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W +++++ e+      g  g+++l 
  XP_021657859.1 163 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELV 256
                     7899******************************************************.7777777777***********999999999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    s++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l+
  XP_021657859.1 257 YSQVYAPTTLAPaRDFWTLRYTTSLENGSLVVCERSLSGSGAGPNaaaASQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 351
                     **************************************99999999999********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++kt+ a+l++ +
  XP_021657859.1 352 ESSKVVAQKTTIAALRYIR 370
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    
MAMAVAQHRE SSSGSINKHL TDSGKYVRYT AEQVEALERV YTECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSQLVC  120
ENGYMRQHLQ SASAATDASC DSVVTTPQHS LRDANNPAGL LSIAEETLAE FLSKATGTAV  180
DWVQMPGMKP GPDSVGIFAI SQSCSGVAAR ACGLVSLEPT KIAEILKDRP SWFRDCRSLE  240
VFTMFPAGNG GTIELVYSQV YAPTTLAPAR DFWTLRYTTS LENGSLVVCE RSLSGSGAGP  300
NAAAASQFVR AEMLPSGYLI RPCDGGGSII HIVDHLNLEA WSVPEVLRPL YESSKVVAQK  360
TTIAALRYIR QIAQETSGEV VYGLGRQPAV LRTFSQRLSR GFNDAINGFN DDGWSLTSCD  420
GAEDVIIAVN STKNLSSTSN PANALSFLGG ILCAKASMLL QNVPPAVLVR FLREHRSEWA  480
DFNVDAYSAA SLKAGSYAFP GMRPARFTGS QIIMPLGHTI EHEELLEVIR LEGHSLLQED  540
AFVSRDIHLL QICCGIDENA VGACSELVFA PIDEMFPDDA PLLPSGFRVI PLDSKTKDAP  600
DVMNTSRTLD LTSSLEVGPA TNHAAGDVSS SHSTRSVLTI AFQFPFENNL QDNVATMARQ  660
YVRSVISSVQ RVAMAISPSG LSLAVGPKLS PGSPEALTLS HWICQSYSYY LGAELLRSDS  720
LGGDSVLKHL WHHQDAILCC SLKSLPVFIF ANQAGLDMLE TTLVALQDIT LDKIFDESGR  780
KALCAEFAKL MQQGFTYLPG GICMSTMGRH VSYEQAIAWK VLAADEDTVH CLAFSFVNWS  840
FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein