PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657952.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 402aa MW: 43584.5 Da PI: 8.4783

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80.5	1.5e-25	149	192	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_021657952.1 149 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 192 79***************************************987 PP
2	QLQ	53	1e-18	82	117	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 F+ aQ+q+L+ Q+l+y+y++a++ vPpeLlq+i+k XP_021657952.1 82 CFSLAQWQELELQALIYRYMLAGAAVPPELLQPIKK 117 69********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MDFHLKQWRT QQHESEEQPS AKMPKLLLNP YQPQPQPQHP SASTASLPLF VPESNNKLSN 60 LSALPDSTPA ATTRFPRMEG SCFSLAQWQE LELQALIYRY MLAGAAVPPE LLQPIKKSVL 120 RSPPYFLHHP LQHYSYYQPT WYWGRAAMDP EPGRCRRTDG KKWRCSRDVV AGQKYCERHV 180 HRGRNRSRKP VEIPTPTSST TTTTIGTSGG GTGGVAGAAF NSTTSIVAPP LGAVTNGASF 240 PFSGQSPSTD LLHLNNGSSD SKTEIKGLLG PEKEVANRNN GHILRHFFDD WPRSHQEPDS 300 AGSNASPMNS ATCLSISMPE NSPSDVSLKL STGNGEEPAG PRGNEREHPQ VSWTGGWGTS 360 QVASMGGPLA EALRSSTSNS SPTSVLHQLP PGSASEPSFV ST

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MDFHLKQWRT QQHESEEQPS AKMPKLLLNP YQPQPQPQHP SASTASLPLF VPESNNKLSN  60
LSALPDSTPA ATTRFPRMEG SCFSLAQWQE LELQALIYRY MLAGAAVPPE LLQPIKKSVL  120
RSPPYFLHHP LQHYSYYQPT WYWGRAAMDP EPGRCRRTDG KKWRCSRDVV AGQKYCERHV  180
HRGRNRSRKP VEIPTPTSST TTTTIGTSGG GTGGVAGAAF NSTTSIVAPP LGAVTNGASF  240
PFSGQSPSTD LLHLNNGSSD SKTEIKGLLG PEKEVANRNN GHILRHFFDD WPRSHQEPDS  300
AGSNASPMNS ATCLSISMPE NSPSDVSLKL STGNGEEPAG PRGNEREHPQ VSWTGGWGTS  360
QVASMGGPLA EALRSSTSNS SPTSVLHQLP PGSASEPSFV ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	4e-84	GRF family protein