PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021657960.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARR-B
Protein Properties Length: 557aa    MW: 61842.6 Da    PI: 6.4011
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021657960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.61.2e-27316369256
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      +++WtpeLH++Fv+aveqL G ++A+P++ile+mkv gLt+++v+SHLQkYR++
  XP_021657960.1 316 IKVDWTPELHKKFVQAVEQL-GVDQAVPSRILEVMKVGGLTRHNVASHLQKYRMH 369
                     5899****************.********************************96 PP
2Myb_DNA-binding41.92.3e-13318367248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT+e+++++v+av+qlG +   +++I + m   g+t+ ++ s++qky+
   XP_021657960.1 318 VDWTPELHKKFVQAVEQLGVDqaVPSRILEVMKvGGLTRHNVASHLQKYR 367
                      57***********************************************7 PP
3Response_reg25.66.3e-10211262109
                     EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
    Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                     l+ +++ + +  +++ le  +y +v  + +  eal  +  k   +++ ++ ++ ++++G   +k +++++ +lp i+++     + + +++ +Ga
  XP_021657960.1  21 LLLAEDSSSAAEMKSKLEAMDY-IVSIFCNENEALSVISSKPesFHVAIVEVSTSNSNGR--FKFLETAK-DLPTIMISNIHCLSIMMKCIALGA 111
                     6666667777789999******.***************666666***************5..66676666.9*******9999************ PP

                     SEEEESS--HHHHHH CS
    Response_reg  95 kdflsKpfdpeelvk 109
                      +fl Kp ++++l++
  XP_021657960.1 112 VEFLWKPLSEDKLRN 126
                     ************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MVCTANYLSA WKDFPKGLSV LLLAEDSSSA AEMKSKLEAM DYIVSIFCNE NEALSVISSK  60
PESFHVAIVE VSTSNSNGRF KFLETAKDLP TIMISNIHCL SIMMKCIALG AVEFLWKPLS  120
EDKLRNIWQH VVHKAFNAGG SVLSESLKPV KDSVVSILQL QVETEEPKNE TLERIENTSP  180
APENDYEYSS GSDRYPAPST PQLKQGARLL DDGDYQDLTN CSTEKESEEH EGESKSVETT  240
CAMTEETLQV GHPQSSIETL IKEKDDSADG VKSENNPSGH PPNNDSLNNP DGNATNPVKA  300
SGLHNSCGTR VNRKKIKVDW TPELHKKFVQ AVEQLGVDQA VPSRILEVMK VGGLTRHNVA  360
SHLQKYRMHR RHILPKEDDR RWSQQRDPVQ RSYSQHKPIM AYPLCHPNHT FPLSPVYPVW  420
GAPSGHPAGV QMWGSPGYAP WPSRENWHWK PYPGMHADAW GCPVMPPPHN PYSSSPQNVT  480
GFHSTGMVDN GCNVPQNSFN LHPAEEVVDK VVKEAINKPW LPLPLGLKPP STDTVLAELS  540
RQGISRIPPH INDSNSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-142ARR-B family protein