PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658048.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 246aa MW: 28582.7 Da PI: 9.6015

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.2	1.2e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr+g+lKKA+E+S+LCdaeva+i+fs++gkl+eys+ XP_021658048.1 9 KRIENKISRQVTFSKRRTGLLKKAHEISILCDAEVALIVFSTKGKLFEYST 59 79***********************************************96 PP
2	K-box	90.4	3.4e-30	82	172	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ ++ +l+ e kL ++ie Lqr++R++ GedL+++sl+eLq+Leqq++++lk++R++Kn+l++e+++elqkk k+l+e+n +L+k+l+ XP_021658048.1 82 NDSGQEGNLSLECPKLMARIEILQRSLRNFAGEDLDPISLRELQHLEQQIDNGLKRVRARKNQLYHESLSELQKKDKALHEQNSMLSKQLK 172 556678899*******************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MGRGRVQLKR IENKISRQVT FSKRRTGLLK KAHEISILCD AEVALIVFST KGKLFEYSTD 60 SSMERILERY ERYSSAERQV ANDSGQEGNL SLECPKLMAR IEILQRSLRN FAGEDLDPIS 120 LRELQHLEQQ IDNGLKRVRA RKNQLYHESL SELQKKDKAL HEQNSMLSKQ LKQNEKSMAE 180 HANWEQRNLG QNPTYFMPPP MLSLPPLTTG STLQTREFMN EKEEATAQIQ LNTMQMPPWM 240 LRHVNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	4e-83	MIKC_MADS family protein