PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658123.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 235aa MW: 27317.6 Da PI: 7.8815

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.8e-15	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd++l+ +v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_021658123.1 12 KGLWKPEEDLILKTYVEAHGEGNWTTVSEKSGLMRGGKSCRLRWKNYL 59 678*******************************************97 PP
2	Myb_DNA-binding	54.5	2.8e-17	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T+eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_021658123.1 65 RGGMTQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 6789****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MENKQVKPLI KKGLWKPEED LILKTYVEAH GEGNWTTVSE KSGLMRGGKS CRLRWKNYLR 60 PNIKRGGMTQ EEEDLIIRMH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL NKRCRTGKRR 120 TADPSNHQNG NDDKYKNKSQ RDSQTTCSTS QKSNPEESDG KKEQKEENTV TDTWMQDAQS 180 MNYYIESPMV PPCSDAFLFN EEPFIAHCDS FVLFESFGYN GEEMYSQVDL QSFML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	6e-65	MYB family protein