PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658160.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 556aa MW: 59922.4 Da PI: 9.686

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	68	88	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C+k F r nL+ H r H XP_021658160.1 68 CEVCNKGFQREQNLQLHRRGH 88 *******************88 PP
2	zf-C2H2	13.2	0.00026	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_021658160.1 142 WKCEKCSKRYAVQSDWKAHSKTC 164 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MAAASSSASF FRSREENQNQ MMQQNPSTAA PTTAPQKKKR NQPGTPNPDA EVIALSPKTL 60 MATNRFLCEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EVKRKVYLCP EPTCVHHDPS 120 RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 180 DSFITHRAFC DALAQESARH PSNLNTIGTH LYGNNHMSLG LSQVGSQISP LQDQNHPTSN 240 MLRLGSAGAA KFDHIIPPSN SSSLPTMPSS GFFISDANQG SFPNKSLHGL MQLHDLQNTS 300 NNSSHTNLFN LGFFSNNAAT PSRMSNSDNA NSSTTTTNLV NSTFMNPNPF NNGNGGQGLF 360 ANNMGDHHVD SAGIPSLYSN SMQQENITPH MSATALLQKA AQMGSTTSSN NSNLLRGLGG 420 SPSTGTKSDR PPLVSTNFGS NTFGNATVGE GGLGTQMESD NQLQGLMNSL ANGGSSIFGG 480 GHSQDNSFGG FTSSGISLDQ LHNSTNFSNV EEAKLHQSLG VGSDKLTLDF LGVGGMVRNI 540 GGGQHGINLS SNNKPF

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MAAASSSASF FRSREENQNQ MMQQNPSTAA PTTAPQKKKR NQPGTPNPDA EVIALSPKTL  60
MATNRFLCEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EVKRKVYLCP EPTCVHHDPS  120
RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  180
DSFITHRAFC DALAQESARH PSNLNTIGTH LYGNNHMSLG LSQVGSQISP LQDQNHPTSN  240
MLRLGSAGAA KFDHIIPPSN SSSLPTMPSS GFFISDANQG SFPNKSLHGL MQLHDLQNTS  300
NNSSHTNLFN LGFFSNNAAT PSRMSNSDNA NSSTTTTNLV NSTFMNPNPF NNGNGGQGLF  360
ANNMGDHHVD SAGIPSLYSN SMQQENITPH MSATALLQKA AQMGSTTSSN NSNLLRGLGG  420
SPSTGTKSDR PPLVSTNFGS NTFGNATVGE GGLGTQMESD NQLQGLMNSL ANGGSSIFGG  480
GHSQDNSFGG FTSSGISLDQ LHNSTNFSNV EEAKLHQSLG VGSDKLTLDF LGVGGMVRNI  540
GGGQHGINLS SNNKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-131	C2H2 family protein