PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658161.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 514aa MW: 55481.6 Da PI: 9.2712

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	26	46	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C+k F r nL+ H r H XP_021658161.1 26 CEVCNKGFQREQNLQLHRRGH 46 *******************88 PP
2	zf-C2H2	13.3	0.00024	100	122	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_021658161.1 100 WKCEKCSKRYAVQSDWKAHSKTC 122 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MYQKNPDAEV IALSPKTLMA TNRFLCEVCN KGFQREQNLQ LHRRGHNLPW KLKQKTTKEV 60 KRKVYLCPEP TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCEKCSKRYA VQSDWKAHSK 120 TCGTREYRCD CGTLFSRRDS FITHRAFCDA LAQESARHPS NLNTIGTHLY GNNHMSLGLS 180 QVGSQISPLQ DQNHPTSNML RLGSAGAAKF DHIIPPSNSS SLPTMPSSGF FISDANQGSF 240 PNKSLHGLMQ LHDLQNTSNN SSHTNLFNLG FFSNNAATPS RMSNSDNANS STTTTNLVNS 300 TFMNPNPFNN GNGGQGLFAN NMGDHHVDSA GIPSLYSNSM QQENITPHMS ATALLQKAAQ 360 MGSTTSSNNS NLLRGLGGSP STGTKSDRPP LVSTNFGSNT FGNATVGEGG LGTQMESDNQ 420 LQGLMNSLAN GGSSIFGGGH SQDNSFGGFT SSGISLDQLH NSTNFSNVEE AKLHQSLGVG 480 SDKLTLDFLG VGGMVRNIGG GQHGINLSSN NKPF

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MYQKNPDAEV IALSPKTLMA TNRFLCEVCN KGFQREQNLQ LHRRGHNLPW KLKQKTTKEV  60
KRKVYLCPEP TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCEKCSKRYA VQSDWKAHSK  120
TCGTREYRCD CGTLFSRRDS FITHRAFCDA LAQESARHPS NLNTIGTHLY GNNHMSLGLS  180
QVGSQISPLQ DQNHPTSNML RLGSAGAAKF DHIIPPSNSS SLPTMPSSGF FISDANQGSF  240
PNKSLHGLMQ LHDLQNTSNN SSHTNLFNLG FFSNNAATPS RMSNSDNANS STTTTNLVNS  300
TFMNPNPFNN GNGGQGLFAN NMGDHHVDSA GIPSLYSNSM QQENITPHMS ATALLQKAAQ  360
MGSTTSSNNS NLLRGLGGSP STGTKSDRPP LVSTNFGSNT FGNATVGEGG LGTQMESDNQ  420
LQGLMNSLAN GGSSIFGGGH SQDNSFGGFT SSGISLDQLH NSTNFSNVEE AKLHQSLGVG  480
SDKLTLDFLG VGGMVRNIGG GQHGINLSSN NKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-124	C2H2 family protein