PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658260.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GATA

Protein Properties

Length: 541aa MW: 60006.1 Da PI: 7.0212

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	45.4	1.1e-14	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_021658260.1 7 CCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 99************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MGKQGPCCHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RADPDDYEDH 60 RGSRVKSISI NKNKDVKLLK RKANHDNGEA GGVASDYYQG YRRVLDEDTS NRSSSGSAIS 120 NSESCAQFGS ADASDLTGPA QSIVWDTMVP SRKRTCVNRP KQSPVEKLTR DLYTIWHEQQ 180 SSCFSGSSEE DLLFESETPM VSVEIGHGSV LIRHPSSIAR DEESEASSLS VENKQYSINE 240 AYSHHVTLPV HNENISVNIP SLVIEKAKNP TGPGMQQEQI KRDKSQHERA QILGNHNSPL 300 CDVDLNEILN FEVFARHLTN EEQQQLLKYL PPFDTAKLPD SIRSMFDSSQ FKENISCFQQ 360 LLVEGVFDLS LSGAKPEECN TLKRLTLSNL LKSKWVEHYH QLKCKNATGK SLVGRGSNVI 420 ASSNSIAAKR LHDSLGQKIP DVKVMKSPKR INMKATYENK EVMDNDGSCF SPRSLFALPP 480 DSGSLMLDSF HYVDESSDQD LLLHVPSNGS FPQAELLHPT LSYGQQASTS SSSTYPRLVR 540 P

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MGKQGPCCHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RADPDDYEDH  60
RGSRVKSISI NKNKDVKLLK RKANHDNGEA GGVASDYYQG YRRVLDEDTS NRSSSGSAIS  120
NSESCAQFGS ADASDLTGPA QSIVWDTMVP SRKRTCVNRP KQSPVEKLTR DLYTIWHEQQ  180
SSCFSGSSEE DLLFESETPM VSVEIGHGSV LIRHPSSIAR DEESEASSLS VENKQYSINE  240
AYSHHVTLPV HNENISVNIP SLVIEKAKNP TGPGMQQEQI KRDKSQHERA QILGNHNSPL  300
CDVDLNEILN FEVFARHLTN EEQQQLLKYL PPFDTAKLPD SIRSMFDSSQ FKENISCFQQ  360
LLVEGVFDLS LSGAKPEECN TLKRLTLSNL LKSKWVEHYH QLKCKNATGK SLVGRGSNVI  420
ASSNSIAAKR LHDSLGQKIP DVKVMKSPKR INMKATYENK EVMDNDGSCF SPRSLFALPP  480
DSGSLMLDSF HYVDESSDQD LLLHVPSNGS FPQAELLHPT LSYGQQASTS SSSTYPRLVR  540
P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-162	GATA family protein