PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658309.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 748aa MW: 83114.3 Da PI: 5.7794

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00053	583	619	13	54
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 R+ i +++ eLrel+P+ a K s + Le+A++++ L XP_021658309.1 583 RQLIQDRIKELRELVPNgA------KCSIDSLLERAIKHMLFL 619 67799************77......777777999999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 748 aa Download sequence
MGTDLHNTLR SLCFNTEWKY AVFWKLKHRA RMVLTWEDAY YDNCEQHDPL ESKCFRETLE 60 HLCGGRYSHD PLGLAVAKMS YHVYCLGEGI VGQVAVTGKH RWIIADKLVT SSISFEFSDG 120 WQSQFSAGIK TIVVVAVVPY GVVQLGSLNK VAEDPKLVTH IKDVFLSLQD SSVGHITGAL 180 QYSMKSSLYL PDLRTKGLDS ESELIPDSLC NLDKAIYKEG PNNQLPMFPY LQKECDNSYF 240 CSLPGIDQNT ADEVANKHGG HVLSTLENDK SVKLLHLGSG ISYLEQQNQV GIDFVDEQKC 300 GGENSVWKDP DVGSKLNVTS HLNNSVKDNI KLYNVVLPNE NFGADLVNYP VDLLDSTVCD 360 RPKSDGMDVY LNGVVNMPES SDMNVKKELE KKLEYQAESS HLDDSNAFLK FSAGCELHEA 420 LGLAFSKGCL YIDCEADKTE SGNIVEVPEG ISISQMTFDT SPENLLEAVV GKVCHSSSDV 480 KSERSVCKSV QSLLTTGKIP EPPSQTKHII CSAGYSIKQS VVEEDTQNCS SSTGVYAAMS 540 SRGFSSTCPS TCSEELDRRP EPAKNNKKRA RPGESCRPRP RDRQLIQDRI KELRELVPNG 600 AKCSIDSLLE RAIKHMLFLE SITKHADKLN KCAESKMYQK GTDASNYEKG SSWAVEVGGH 660 LKVSSIMVEN LNKNGQMLVE MLCEECSHFL EIAEAIRSLG LTILKGITEV HGEKIWICFM 720 VEGQNNRVMH RMDILWSLVQ ILQPKTSN

Sequence ? help Back to Top

Protein Sequence Length: 748 aa Download sequence

MGTDLHNTLR SLCFNTEWKY AVFWKLKHRA RMVLTWEDAY YDNCEQHDPL ESKCFRETLE  60
HLCGGRYSHD PLGLAVAKMS YHVYCLGEGI VGQVAVTGKH RWIIADKLVT SSISFEFSDG  120
WQSQFSAGIK TIVVVAVVPY GVVQLGSLNK VAEDPKLVTH IKDVFLSLQD SSVGHITGAL  180
QYSMKSSLYL PDLRTKGLDS ESELIPDSLC NLDKAIYKEG PNNQLPMFPY LQKECDNSYF  240
CSLPGIDQNT ADEVANKHGG HVLSTLENDK SVKLLHLGSG ISYLEQQNQV GIDFVDEQKC  300
GGENSVWKDP DVGSKLNVTS HLNNSVKDNI KLYNVVLPNE NFGADLVNYP VDLLDSTVCD  360
RPKSDGMDVY LNGVVNMPES SDMNVKKELE KKLEYQAESS HLDDSNAFLK FSAGCELHEA  420
LGLAFSKGCL YIDCEADKTE SGNIVEVPEG ISISQMTFDT SPENLLEAVV GKVCHSSSDV  480
KSERSVCKSV QSLLTTGKIP EPPSQTKHII CSAGYSIKQS VVEEDTQNCS SSTGVYAAMS  540
SRGFSSTCPS TCSEELDRRP EPAKNNKKRA RPGESCRPRP RDRQLIQDRI KELRELVPNG  600
AKCSIDSLLE RAIKHMLFLE SITKHADKLN KCAESKMYQK GTDASNYEKG SSWAVEVGGH  660
LKVSSIMVEN LNKNGQMLVE MLCEECSHFL EIAEAIRSLG LTILKGITEV HGEKIWICFM  720
VEGQNNRVMH RMDILWSLVQ ILQPKTSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein