PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021658409.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 205aa    MW: 23360 Da    PI: 9.5839
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021658409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.61.4e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krie+ks rqvtfskRrng++KKA EL vLCd+++ vi+fs++gklye++s
  XP_021658409.1  9 KRIEDKSSRQVTFSKRRNGLIKKARELTVLCDVQIGVIVFSNSGKLYEFCS 59
                    79***********************************************96 PP
2K-box57.46.2e-20831721099
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                      +++++s+q +++  k+ +e Lq    +l G   e+Ls+ +L +Le+q   +l++iR+kK+el+l+ i+ l +ke +l+e+n  L++++e
  XP_021658409.1  83 GANDTKSYQVDYSSSKSYTELLQIVETQLEGPTCEQLSVTDLIKLENQFAAALTQIRAKKTELMLDFIKALHNKEIMLKEDNVHLEREME 172
                     567899*****************999************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MGRKKVEMKR IEDKSSRQVT FSKRRNGLIK KARELTVLCD VQIGVIVFSN SGKLYEFCST  60
GSMANFLKEY QRHLEVEAAS VKGANDTKSY QVDYSSSKSY TELLQIVETQ LEGPTCEQLS  120
VTDLIKLENQ FAAALTQIRA KKTELMLDFI KALHNKEIML KEDNVHLERE MEAMKNGVGM  180
VKRLRTHPNL HLVHSPQQAT LSLLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03710.37e-46MIKC_MADS family protein