PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658410.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 158aa MW: 18074.2 Da PI: 10.3689

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.3	8.4e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskRrng++KKA EL vLCd+++ vi+fs++gklye++s XP_021658410.1 9 KRIEDKSSRQVTFSKRRNGLIKKARELTVLCDVQIGVIVFSNSGKLYEFCS 59 79***********************************************96 PP
2	K-box	51.2	5.5e-18	60	125	34	99
K-box 34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + R+l G e+Ls+ +L +Le+q +l++iR+kK+el+l+ i+ l +ke +l+e+n L++++e XP_021658410.1 60 TGRQLEGPTCEQLSVTDLIKLENQFAAALTQIRAKKTELMLDFIKALHNKEIMLKEDNVHLEREME 125 569***********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MGRKKVEMKR IEDKSSRQVT FSKRRNGLIK KARELTVLCD VQIGVIVFSN SGKLYEFCST 60 GRQLEGPTCE QLSVTDLIKL ENQFAAALTQ IRAKKTELML DFIKALHNKE IMLKEDNVHL 120 EREMEAMKNG VGMVKRLRTH PNLHLVHSPQ QATLSLLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65050.2	1e-33	MIKC_MADS family protein