PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658608.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 307aa MW: 36447.2 Da PI: 6.3589

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.9	4.3e-26	46	127	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt+qe+++Li +r e+e+++ +k+kk+lWe vs+k+rerg++r+p qCk+kw+nl +ryk ++++ ++ +cp+f++l+ XP_021658608.1 46 QWTEQETKDLIGIRAELEKDFTVAKRKKALWEIVSAKLRERGYRRTPDQCKCKWKNLINRYKGKETSDPEN----GLHCPFFEELH 127 7************************************************************99999974....457****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MFPIFGSVNI DYLRPISMAM ASTMLSPEAD NSPSASKEKG PQPQQQWTEQ ETKDLIGIRA 60 ELEKDFTVAK RKKALWEIVS AKLRERGYRR TPDQCKCKWK NLINRYKGKE TSDPENGLHC 120 PFFEELHAVF TERAKNMQPL LFDSEAGSTR AKKRVKRMSA DRSFDELSED EDEDDDGSGE 180 ERLARSNSQK RKRERFQMEM PSRVTSTSNP NIIGIQEMLK EFFQQQQQME MQWREMMEKR 240 ANEQRLFELE WRQSMEKIEK ERLMIELVWR EREEQRRTRE ESRAERRDAL LTTLLNKLIH 300 ENDIEGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	100	KRKKALWEIVSAKLRERGYRRTPDQCKCKWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	5e-24	Trihelix family protein