PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021658728.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 844aa    MW: 92298 Da    PI: 5.9503
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021658728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.45.1e-182583357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+++Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_021658728.1 25 KYVRYTAEQVDALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                    56789****************************************************97 PP
2START157.61e-491653722204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W +++++ e+      g  g+++l 
  XP_021658728.1 165 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTVELV 258
                     7899******************************************************.7777777777***********999999999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+ +l+p Rdf+++Ry+ +l+ g++v++++S++     p+    s++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l+
  XP_021658728.1 259 YSQVYAPMTLAPaRDFWTLRYTTSLENGSLVVCERSLSGSGAGPNaaaASQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLY 353
                     **************************************99999999999********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++ a+l++ +
  XP_021658728.1 354 ESSKVVAQKMTIAALRYIR 372
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    
MAMAVAQHRE SSNSSINKHL TDSGKYVRYT AEQVDALERV YAECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRNESSRL QTVNRKLTAM NKLLMEENDR LQKQVSQLVC  120
ENGYMRQQLQ TVNASAATDA SCDSVVTTPQ HSLRDANNPA GLLSIAEETL AEFLSKATGT  180
AVDWVQMPGM KPGPDSVGIF AISQSCSGVA ARACGLVSLE PTKIAEILKD RPSWFRDCRS  240
LEVFTMFPAG NGGTVELVYS QVYAPMTLAP ARDFWTLRYT TSLENGSLVV CERSLSGSGA  300
GPNAAAASQF VRAEMLPSGY LIRPCEGGGS IIHIVDHLNL EAWSVPEVLR PLYESSKVVA  360
QKMTIAALRY IRQIAQETSG EVVYGFGRQP AVLRTFSQRL SRGFNDAING FNDDGWSLMS  420
CDGAEDIIIA VNSTKNLGST SNPSNSFSFL GGILCAKASM LLQNVPPAVL VCFLREHRSE  480
WADFNVDAYS AASLKAGSYA FPGMRPTRFT GSQVIMPLGH TIEHEELLEV IRLEGHSLAQ  540
EDAFISRDIH LLQICSGIDE NAVGACSELV FAPIDEMFPD DAPLLPSGFR VIPLDSKTRD  600
AQDAVNTSRT LDLTTSLEVG PATNHSAGDA LSSHSTRSVL TIAFQFPFES NLQDNVATMA  660
RQYVRSVISS VQRVAMAISP SGLCPSVGPK LSPSSPEALT LAHWICQSYK YYLGAELLSS  720
DSLGGDSVLK HLWHHQDAIL CCSLKSLPIF IFANQTGLDM LETTLVALQD ITLDKIFDES  780
GRKALCADFA KLMEQGFAYL PGGICMSTMG RHVSYEQAVA WKVLAADEST VHCLAFSFVN  840
WSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein