PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658862.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 241aa MW: 28162.2 Da PI: 8.198

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96	1.6e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs +gkl+eys+ XP_021658862.1 9 KRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSYKGKLFEYST 59 79***********************************************96 PP
2	K-box	106.9	2.3e-35	83	173	10	100
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + +e+++ e+++Lk+++e Lqr++Rh++Ged++sLslkeLq+LeqqLe++lk+iR++Kn+l++e+i+elqkkek++qe+n +L k+++e XP_021658862.1 83 DLNSQENWTLEYNRLKAKVELLQRNLRHYMGEDIDSLSLKELQNLEQQLETALKHIRTRKNQLMYESISELQKKEKAIQEQNSMLAKQIKE 173 445679**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFSY KGKLFEYSTD 60 SCMEKILERY ERYSYAERQL TADLNSQENW TLEYNRLKAK VELLQRNLRH YMGEDIDSLS 120 LKELQNLEQQ LETALKHIRT RKNQLMYESI SELQKKEKAI QEQNSMLAKQ IKENEKAVAQ 180 QALWEQHNHG TNMSPFLLPQ PPLPCPNIGG TYQEEAPEGR RNELDLTLEP IYSCHLGCFT 240 T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	1e-109	MIKC_MADS family protein