PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658864.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 241aa MW: 27979.7 Da PI: 8.1124

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.9	1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021658864.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	99.4	5.1e-33	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++ ++++qe+ kLk+++e Lqr+qR+llGedL++L+ +L+qLe+qL++slk+iRs+K++++l+ ++elq+ke++l e+n+aLrkklee XP_021658864.1 82 QSMHDIQNCYQEYLKLKEKVEALQRSQRNLLGEDLGDLNTTDLKQLEHQLDSSLKQIRSTKTQFMLDRLSELQRKEESLLETNNALRKKLEE 173 566788***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SSMAKTIEKY HRCSYAPLEA NQSMHDIQNC YQEYLKLKEK VEALQRSQRN LLGEDLGDLN 120 TTDLKQLEHQ LDSSLKQIRS TKTQFMLDRL SELQRKEESL LETNNALRKK LEETDAALQS 180 SWEAREQCVQ YNHQPTQPDD FANPLQCNRN LRIGSNADER DKVTIATTEQ NFNGFIPAWM 240 L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	2e-98	MIKC_MADS family protein