PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658888.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CO-like

Protein Properties

Length: 416aa MW: 45425.6 Da PI: 4.8278

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18	6e-06	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++++ +C+++ +lC +C + H+ H+ XP_021658888.1 4 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSAnalskrHS 43 7*****************************5566666676 PP
2	zf-B_box	21.3	5.6e-07	44	89	2	41
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++ C++++++++ + C + + lC++C H + H++++ XP_021658888.1 44 RNLLCERCNSQPALIRCSEESISLCQNCDWMVHGNssstttHKRQT 89 6789*************************99995588888888766 PP
3	CCT	61.1	3.6e-21	359	402	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktRkFeK++rY+sRKa+A+ R RvKGrFvk+ XP_021658888.1 359 RSNAVMRYKEKKKTRKFEKRVRYASRKARADVRRRVKGRFVKAG 402 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MGYICDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSK RHSRNLLCER CNSQPALIRC 60 SEESISLCQN CDWMVHGNSS STTTHKRQTI NCYSGCPSAS ELSSLWSFVL DFPSTAESTC 120 EQELGLMSIA ENSSTSKWGP NENAINQNVS GAVPADKARD MAKSSVYDGT SSMPELISMS 180 NNPEQPVGSA NAPLPKLCCP GTKGPALCGD DDLYEDFNMD EVDLNLENYE ELFGFTLNNS 240 EELFENGGID SLFGTKDMST VDSNCQGAVE AEGLSVGLVN AMQPAYSYAA SADSMRSAKT 300 EPVLCFTTRQ GHSSLSFSGL TGESSVGDYQ DCGASSMLLM GEPPWCPPCP ESSCPSANRS 360 NAVMRYKEKK KTRKFEKRVR YASRKARADV RRRVKGRFVK AGDTYDYDPL SETRSY

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MGYICDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSK RHSRNLLCER CNSQPALIRC  60
SEESISLCQN CDWMVHGNSS STTTHKRQTI NCYSGCPSAS ELSSLWSFVL DFPSTAESTC  120
EQELGLMSIA ENSSTSKWGP NENAINQNVS GAVPADKARD MAKSSVYDGT SSMPELISMS  180
NNPEQPVGSA NAPLPKLCCP GTKGPALCGD DDLYEDFNMD EVDLNLENYE ELFGFTLNNS  240
EELFENGGID SLFGTKDMST VDSNCQGAVE AEGLSVGLVN AMQPAYSYAA SADSMRSAKT  300
EPVLCFTTRQ GHSSLSFSGL TGESSVGDYQ DCGASSMLLM GEPPWCPPCP ESSCPSANRS  360
NAVMRYKEKK KTRKFEKRVR YASRKARADV RRRVKGRFVK AGDTYDYDPL SETRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-118	CO-like family protein